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Voyage details and related metadata, reports, events and data.

SS2013_T03    - is a Marine National Facility voyage

Period: 2013-07-27 00:00 to 2013-08-10 00:00 UTC

Duration: 14.00 days

From: Broome To: Brisbane

Region: Northern coast of Australia, Great Barrier Reef,

Ship: Southern Surveyor [details]

Description: MNF Southern Surveyor research voyage SS2013_t03. Ship time on this transit voyage was allocated to four programs listed below 1. Microbial oceanography of northern Australia - primary program,lead by UTS 2. Global drifter program - lead by Dr Kiki Dethmers at NAMRA-AIMS, 3. Swath mapping around the GBR, lead by Dr Robin Beaman (JCU) and Dr Gordon Keith(CSIRO) 4. Greenhouse gas measurement, lead by Dagmar Kubistin at UoW With the Scientific Objectives: 1-1. To determine the significance, diversity and seasonality of nitrogen fixation by microorganisms in the nitrogen limited waters of NW and NE Australia (Lauren Messer). 1-2. To examine the expression of light harvesting genes in phototrophic bacteria in different optical climates in the northern coastal and oceanic region of Australia (Jaume Biblioni). 1-3. To understand the biogeochemical role of eukaryotes with respect to N and Si uptake processes. 1-4. To understand the diversity and biogeochemical role of eukaryotes with respect to N uptake processes. 1-5. To reveal the species composition, photophysiology and carbon fixation of phytoplankton in optically complex coastal and ocean waters surrounding Northern Australia. 1-6. To obtain a new understanding of the processes involved in marine snow formation at different depths within the pristine waters of Northern Australia. 2-1. To determine the direction and velocity of subsurface currents across the Timor and Arafura Seas 2-2. To obtain baseline parameters for developing a dispersal prediction model of derelict fishing gear 2-3. To observe (and potentially retrieve) derelict fishing gear, in particular 'ghost nets' 2-4. To record and identify marine wildlife sightings across the Arafura and Timor Seas 3-1 To determine the full spatial distribution of the Great Barrier Reef (GBR) shelf edge submerged reefs, i.e. can we identify their northern and southern limits? 3-2 To understand the detailed geomorphology of the submerged reefs and shelf edge features at these northern and southern limits. 3-3 To collect swath data in those parts of the upper-slope that currently have no swath data. 4-1 Make continuous measurements of carbon dioxide, methane, nitrous oxide, carbon monoxide and ozone as the RV Southern Surveyor travels along the chosen transect; 4-2 Assimilate measured data into a variety of atmospheric chemical transport, inverse and statistical models to improve our knowledge and understanding of atmospheric greenhouse gases and their sources and sinks.

Leader: M. Doblin (UTS)

Project: National Facility External Users: M Doblin (UTS) [details]


Voyage extents: 27° 23.5' S to 9° 14.8' S    121° 34.6' E to 153° 38.2' E Get voyage track shapefile Get CSV


Marlin Metadata:-

  • Southern Surveyor Voyage SS2013_T03 ADCP Data [details]

  • Southern Surveyor Voyage SS2013_T03 CTD Data [details]

  • Southern Surveyor Voyage SS2013_T03 Hydrology Data [details]

  • Southern Surveyor Voyage SS2013_T03 Multibeam Echosounder Data [details]

  • Southern Surveyor Voyage SS2013_T03 Raw Data Tapes and Documentation [details]

  • Southern Surveyor Voyage SS2013_T03 Underway Data [details]

  • IPT Metadata:-

  • Marine Microbes from RV Southern Surveyor voyage SS2013_T03, Australia (2013)

    View at      Ocean Biodiversity Information System (OBIS)      OBIS Australia IPT

  • Participants - on ship:- Click on column header to sort

    NameRoleOrganisation
    Anoosh Sarraf MNF Computing Support CMAR
    Charlotte Robinson PhD Student University of Technology Sydney
    Gustavo Hinestrosa PhD Student/Swath University of Sydney
    James McLaughlin Research fellow / Alternate Chief Scientist CMAR
    Jaume Bibiloni Isaksson PhD Student University of Technology Sydney
    Kiki Dethmers Chief Investigator AIMS
    Kirralee Baker PhD Student University of Technology Sydney
    Lauren Messer PhD Student University of Technology Sydney
    Lisa Woodward MNF Voyage Manager CMAR
    Martina Doblin Chief Scientist University of Technology Sydney
    Rick Smith MNF Swath Support CMAR
    Rob Beaman Chief Investigator/Swath James Cook University
    Rod Palmer MNF Electronics Support CMAR
    Shalin Seebah Post-doc University of Technology Sydney
    Sue Reynolds MNF Hydrochemistry CMAR

    This list includes those that may have only been on part of the voyage. See voyage reports on 'Reports and Maps' tab for details.

    MNF Reports

    Publications from data derived from this voyage

    Journal Article

    • C.M.Robinson, N.Cherukuru, N.J.Hardman-Mountford, J.D.Everett, M.J.McLaughlin, K.P.Davies, V.Van Dongen-Vogels, P.J.Ralph, M.A.Doblin, (2017) - Phytoplankton absorption predicts patterns in primary productivity in Australian coastal shelf waters. Estuarine, Coastal and Shelf Science Volume 192, 5 June 2017, Pages 1-16 10.1016/j.ecss.2017.04.012

    • Messer, Lauren F,Mahaffey, Claire,M Robinson, Charlotte,Jeffries, Thomas C,Baker, Kirralee G,Bibiloni Isaksson, Jaime,Ostrowski, Martin,Doblin, Martina A,Brown, Mark V,Seymour, Justin R (2016) High levels of heterogeneity in diazotroph diversity and activity within a putative hotspot for marine nitrogen fixation. The ISME Journal 10 pp1499-1513. 10.1038/ismej.2015.205

    Search for publications and reports from this and other voyages

    Data publishing

    This is a list of online datasets hosted by CSIRO. Other processed datasets hosted by collaborating organisations may be found on the 'Metadata' tab.
    Use the Get data link on the right to extract data using the NCMI Data Trawler.

    Data StreamData SummaryGet data
    ADCP Data
    Time (UTC): 2013-07-27 08:07 to 2013-08-09 14:08
    Latitude: -26.10 to -9.25
    Longitude: 121.58 to 153.64
    Ensembles: 2,362
    Get Data from Trawler

    Download NetCDF ss2013_t03_ADCP_nc.zip

    Overview ADCP Dataset HTML

    Download Processing Report ss2013_t03ADCP.pdf

    Marine biodiversity observations and/or samples
    Time (UTC): 2013-07-31 06:03 to 2013-08-08 08:39
    Latitude: -24.55 to -10.54
    Longitude: 132.93 to 153.63
    Depth range: 5 to 80 m
    Occurrences: 149024
    Taxa count: 910
    Get Data from Trawler

    CTD profile
    Time (UTC): 2013-07-27 22:07 to 2013-08-08 23:08
    Latitude: -24.58 to -10.54
    Longitude: 122.26 to 153.63
    Quantity: 23 Casts
    Max Pressure: 1000 db
    Get Data from Trawler

    Download CTD plots ss2013_t03_CTD_plots_pdf.zip

    Download NetCDF data ss2013_t03_CTD_avg_nc.zip

    Processing report: ss2013_t03_CTD.pdf

    Hydrology
    Time (UTC): 2013-07-27 22:07 to 2013-08-08 23:08
    Latitude: -24.58 to -10.54
    Longitude: 122.26 to 153.63
    Quantity: 23 Casts
    Max Pressure: 801.5 db
    Get Data from Trawler

    Ammonia Analysis README.txt

    Download CSV format -MNF_SS2013_T03_hydrology_trawler.zip

    Download NetCDF format - ss2013_t03_HYD_nc.zip (excludes ammonia)

    Processing report: ss2013_t03HYD.pdf

    Multibeam echosounder
    Time (UTC): 2013-07-27 16:07 to 2013-08-09 15:08
    Latitude: -26.05 to -9.25
    Longitude: 121.62 to 153.64
    Datafiles: 340
    Total size: 21.75 Gb
    Get Data from Trawler

    Underway
    Time (UTC): 2013-07-27 07:07 to 2013-08-10 00:08
    Latitude: -18.00
    Longitude: 122.22
    Track length: 5708.603 km
    Locations: 236,320
    Measurements: 4,789,977
    Get Data from Trawler

    Download 5 sec NetCDF dataset ss2013_t03UWYnc.zip

    Deployments by start time:- Click on column header to sort. Use link on 'Deployment' to see full details. Use the CSV button at the bottom to export data (tab delimited).

    Search for deployments from this voyage and others

    Deployment OperationStationCastGearProject Start and end timesStart LocationEnd LocationDepthDescription
    ADCP Data [details]   RDI Ocean Surveyor Acoustic Doppler current profiler 2375 2013-07-27 08:54 2013-08-09 14:14 -17.8491 121.9543 -26.0953 153.4126 653.5
    CTD Cast / Hydrology [details] 1   Cast 1 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-27 22:47 2013-07-27 22:58 -16.0903 122.2630 -16.0901 122.2628 5.4
    CTD Cast / Hydrology [details] 2   Cast 2 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-28 07:08 2013-07-28 07:25 -15.1509 122.9116 -15.1505 122.9114 92.1
    CTD Cast / Hydrology [details] 3   Cast 3 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-28 22:36 2013-07-28 22:51 -13.5996 125.0369 -13.5995 125.0375 10
    CTD Cast / Hydrology [details] 4   Cast 4 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-28 23:55 2013-07-29 00:10 -13.5998 125.0357 -13.6006 125.0352 76.7
    CTD Cast / Hydrology [details] 5   Cast 5 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-29 07:07 2013-07-29 07:19 -13.0267 125.9536 -13.0262 125.9547 58.1
    CTD Cast / Hydrology [details] 6   Cast 6 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-29 22:15 2013-07-29 22:30 -11.8821 128.2763 -11.8807 128.2755 117.6
    CTD Cast / Hydrology [details] 7   Cast 7 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-30 07:01 2013-07-30 07:07 -11.2705 129.5241 -11.2702 129.5235 21.3
    CTD Cast / Hydrology [details] 8   Cast 8 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-30 21:45 2013-07-30 21:55 -10.7517 131.7527 51
    CTD Cast / Hydrology [details] 9   Cast 9 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-31 06:03 2013-07-31 06:15 -10.5983 132.9305 -10.5970 132.9295 39.7
    CTD Cast / Hydrology [details] 10   Cast 10 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-07-31 21:28 2013-07-31 21:37 -10.6520 135.1642 -10.6496 135.1635 45.2
    CTD Cast / Hydrology [details] 11   Cast 11 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-01 06:01 2013-08-01 06:09 -10.6827 136.4414 -10.6833 136.4433 45.3
    CTD Cast / Hydrology [details] 12   Cast 12 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-01 21:10 2013-08-01 21:18 -10.7465 138.7743 -10.7454 138.7753 47.1
    CTD Cast / Hydrology [details] 13   Cast 13 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-02 04:58 2013-08-02 05:07 -10.8163 139.9612 -10.8160 139.9612 44.7
    CTD Cast / Hydrology [details] 14   Cast 14 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-03 20:46 2013-08-03 21:05 -10.5428 143.9848 -10.5416 143.9840 100
    CTD Cast / Hydrology [details] 15   Cast 15 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-04 20:45 2013-08-04 21:00 -13.8945 144.3955 -13.8939 144.3958 149.9
    CTD Cast / Hydrology [details] 16   Cast 16 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-04 21:34 2013-08-04 21:49 -13.8956 144.3988 -13.8958 144.3990 100.6
    CTD Cast / Hydrology [details] 17   Cast 17 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-05 20:46 2013-08-05 20:58 -16.7167 146.3554 -16.7189 146.3569 175.3
    CTD Cast / Hydrology [details] 18   Cast 18 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-05 21:27 2013-08-05 21:41 -16.7252 146.3615 -16.7288 146.3630 99.5
    CTD Cast / Hydrology [details] 19   Cast 19 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-06 20:32 2013-08-06 20:43 -19.0560 148.9754 -19.0563 148.9760 110
    CTD Cast / Hydrology [details] 20   Cast 20 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-06 21:16 2013-08-06 21:25 -19.0630 148.9776 -19.0654 148.9781 57.5
    CTD Cast / Hydrology [details] 21   Cast 21 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-07 20:27 2013-08-07 20:43 -20.9772 152.5016 -20.9753 152.5003 135.4
    CTD Cast / Hydrology [details] 22   Cast 22 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-08 20:39 2013-08-08 21:10 -24.5472 153.6283 -24.5518 153.6314 501
    CTD Cast / Hydrology [details] 23   Cast 23 CTD 21,Conductivity CTD 21 - SN 3309,Fluorometer-CTD 21 -Chelsea-06-5941-001,Licor - CTD 21 - SN 70371,Oxygen-CTD 21-SBE 43-SN 2125,Pressure CTD 21,Temperature CTD 21 - SN 5422,Transmissometer - CTD 22 -CST-1421DR 2375 2013-08-08 22:47 2013-08-08 23:44 -24.5815 153.6317 -24.5891 153.6349 801.5
    Multibeam echosounder [details]   EM300 Multibeam Echosounder 2013-07-27 16:32 2013-08-09 15:18 -16.8201 121.6188 -26.1023 153.4088 2926.3
    Underway System [details]   Air Temperature Sensor-HMP230,Barometer,Doppler speed log,Fluorometer WS3S-443P,Gill Ultrasonic Wind Sensor,Gill Ultrasonic Wind Sensor,Humidity Sensor-HMP230,IMOS Port Pyranometer-SN 35122F3,IMOS Port Radiometer-SN 35111F3,IMOS Stbd Pyranometer-SN 35123F3,IMOS Stbd Radiometer-SN 35093F3,IMOS rain gauge,IMOS rain gauge,Licor - LI-190SL Q46072,RM Young 05106 wind monitor-75621,RM Young 05106 wind monitor-75621,RM Young 05106 wind monitor-75621,RM Young Rain Gauge,Seapath 200,Seapath 200,Seapath 200,Simrad EK60 echosounder,ThermoSalinoGraph (TSG)-SS-SN 1777,ThermoSalinoGraph (TSG)-SS-SN 1777 2375 2013-07-27 07:54 2013-08-10 00:16 -18.0003 122.2185 -27.3921 153.1546

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