Voyage details and related metadata, reports, events and data.
IN2018_T02
- is a Marine National Facility voyage
Title: Harmful Algal Blooms And Their Long-Term Sediment Record In East Coast Tasmanian Waters (Chief Scientist: Gustaaf Hallegraeff, IMAS/UTAS)
Voyage details on MNF site: https://mnf.csiro.au/en/Voyages/IN2018_T02
Period: 2018-05-13 22:02 to 2018-05-20 22:30 UTC
Duration: 7.02 days
From: Brisbane To: Hobart
Region: Southeast Australian coast; Bass Strait; East and southeast Tasmanian coast
Ship: Investigator (RV) [details]
Description: Harmful Algal Blooms And Their Long-Term Sediment Record In East Coast Tasmanian Waters (Chief Scientist: Gustaaf Hallegraeff, IMAS/UTAS) Unprecedented toxic dinoflagellate blooms occurred off east coast Tasmania in 2012 and 2015/2016. These events led to a global shellfish product recall (AUD23M loss), lengthy (4 months) closures of mussel, oyster, scallop, and rock lobster fisheries, and 4 human hospitalisations (Paralytic Shellfish Poisoning). While the causative Alexandrium dinoflagellate had been previously detected, genetic evidence suggests that blooms represent a cryptic genotype newly stimulated by climate-driven increased water column stratification. We seek to characterize blooms from with the long time (1000+ yr) ancient DNA sediment record using novel genetic methods.
Leader: Gustaaf Hallegraeff (UTAS/IMAS)
Projects:
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Harmful Algal Blooms and their long term sediment record in East Coast Tasmanian waters [details] Primary
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Investigator National Facility - transit voyage [details] Primary
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CSIRO Educator on Board [details] Supplementary
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IMOS Australian Continuous Plankton Recorder (AusCPR) survey [details] Supplementary
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Remote-ROAM: mobile modelling sea trials [details] Supplementary
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Spatial and temporal variability in the distribution and abundance of seabirds and marine mammals [details] Supplementary
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IMOS Australian Continuous Plankton Recorder (AusCPR) survey [details] Piggy-back

Voyage extents: 43° 16.3' S to 26° 42.5' S 147° 20.3' E to 153° 52.5' E Get voyage track shapefile Get CSV
Marlin Metadata:-













Metadata from OBIS Australia datasets:- biological data is published via the OBIS-AU IPT server and delivered to one or more of OBIS, ALA and GBIF
Download from OBIS Australia IPT View at - Ocean Biodiversity Information System (OBIS) Atlas of Living Australia (ALA) GBIF
Download from OBIS Australia IPT View at - Ocean Biodiversity Information System (OBIS) GBIF
Download from OBIS Australia IPT View at - Ocean Biodiversity Information System (OBIS) Atlas of Living Australia (ALA) GBIF
Cruise Summary Report at SeaDataNet:-
Participants - on ship:-
Name | Role | Organisation | Project |
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Andrew McMinn | Alternative Chief Scientist | University of Tasmania | Harmful Algal Blooms and their long term sediment record in East Coast Tasmanian waters |
Eric Woehler | Lead Principal investigator | Australasian Seabird Group | Spatial and temporal variability in the distribution and abundance of seabirds and marine mammals |
Farhan Rizwi | Supplementary LPI | CSIRO Oceans & Atmosphere - Hobart | Remote-ROAM: mobile modelling sea trials |
Gustaaf Hallegraeff | Chief Scientist | University of Tasmania | Harmful Algal Blooms and their long term sediment record in East Coast Tasmanian waters |
Stephen Thomas | Voyage Manager | Marine National Facility | Voyage Management on RV Investigator |
Participants - shore based:-
Name | Role | Organisation | Project |
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Emlyn Jones | PI - ROAM trials | CSIRO Oceans & Atmosphere - Hobart | Remote-ROAM: mobile modelling sea trials |
This list includes those that may have only been on part of the voyage. See voyage reports on 'Reports and Maps' tab for details.
Marine National Facility Reports - plans, summaries and data processing
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IN2018_T02 Voyage Plan
- includes objectives, investigator details, proposed data collection, voyage track and equipment to be used.
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IN2018_T02 Voyage Scientific Highlights
- report of the key outputs
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IN2018_T02 Triaxus Data Processing Report
- details of data processing steps, calibration information, instruments used and any issues with the data.
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IN2018_T02 Underway Data Processing Report
- details of data processing steps, calibration information, instruments used and any issues with the data.
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IN2018_T02 ADCP Data Processing Report
- details of data processing steps, calibration information, instruments used and any issues with the data.
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IN2018_T02 Voyage Summary
- includes preliminary results, voyage narrative, types of data collected with C77/ROSCOP codes.
- View Survey map
Publications, reports and datasets from this voyage.
Dataset
- Bakker, Dorothee C E; Pfeil, Benjamin (2020): SOCATv2019 metadata list with links to data in original SOCAT format and cruise documentation files. PANGAEA, 10.1594/PANGAEA.919935
- Hallegraeff, Gustaaf; Boyd, Matt; Vandenbossche, Phil; Navidad, Cisco; Taylor, Charlie; Plunkett, Tom (2022): IN2018_T02 Brisbane to Hobart Transit Bathymetry 10m - 210m Multi-resolution AusSeabed products. v1. CSIRO. Data Collection 10.25919/r69s-ry93
- Paine, B. (2023). Dinoflagellate cyst distribution over the past 9 kyrs BP on the east coast Tasmania, southeast Australia [Data set]. Institute for Marine and Antarctic Studies (IMAS), University of Tasmania (UTAS). 10.25959/24kp-r337
- Paine, Bradley (2021) Coccolithophore assemblages of a 9 000 year old marine sediment core from a climate hotspot in Tasmania, southeast Australia. IMAS metadata External link to reference
IPT Resource
- Coccolithophore assemblages of a 9,000 year old marine sediment core from a climate hotspot in Tasmania, southeast Australia (2018) (Darwin Core Archive) External link to reference
- Dinoflagellate cyst distribution over the past 9 kyrs BP on the east coast Tasmania, southeast Australia (2018) (Darwin Core Archive) External link to reference
- IMOS - Phytoplankton Abundance and Biovolume (CPR), Australia (2007 to present) (Darwin Core Archive) External link to reference
Journal Article
- Armbrecht, L.,Hallegraeff, G.,Bolch, C. J. S.,Woodward, C.,Cooper, A. (2021) Hybridisation capture allows DNA damage analysis of ancient marine eukaryotes. Scientific Reports 11 pp-. 10.1038/s41598-021-82578-6
- Armbrecht, Linda,Bolch, Christopher J S,Paine, Bradley,Cooper, Alan,McMinn, Andrew,Woodward, Craig,Hallegraeff, Gustaaf (2024) Recovering sedimentary ancient DNA of harmful dinoflagellates off Eastern Tasmania, Australia, over the last 9000 years. ISME Communications pp-. 10.1093/ismeco/ycae098
- Armbrecht, Linda,Herrando-Pérez, Salvador,Eisenhofer, Raphael,Hallegraeff, Gustaaf M.,Bolch, Christopher J. S.,Cooper, Alan (2020) An optimized method for the extraction of ancient eukaryote DNA from marine sediments. Molecular Ecology Resources pp-. 10.1111/1755-0998.13162
- Daudt, Nicholas W.,Woehler, Eric J.,Schofield, Matthew R.,Smith, Robert O.,Bugoni, Leandro,Rayment, William J. (2024) Seabird assemblages are linked to the major western boundary current off eastern Australia. Progress in Oceanography 223 pp103215-. 10.1016/j.pocean.2024.103215
- Lucieer, Vanessa,Flukes, Emma,Monk, Jacquomo,Walsh, Peter (2024) Geomorphometric maps of Australia’s Marine Park estate and their role in improving the integrated monitoring and management of marine ecosystems. Frontiers in Marine Science 10 pp-. 10.3389/fmars.2023.1302108
- McEnnulty, Felicity R.,Davies, Claire H.,Armstrong, Asia O,Atkins, Natalia,Coman, Frank,Clementson, Lesley,Edgar, Steven,Eriksen, Ruth S.,Everett, Jason D.,Anthony Koslow, J.,Lønborg, Christian,McKinnon, A. David,Miller, Margaret,O’Brien, Todd D.,Pausina, Sarah A.,Uribe-Palomino, Julian,Rochester, Wayne,Rothlisberg, Peter C.,Slotwinski, Anita,Strzelecki, Joanna (2020) A database of zooplankton biomass in Australian marine waters. Scientific Data 7 pp-. 10.1038/s41597-020-00625-9
- Paine, Bradley,Armbrecht, Linda,Bolch, Christopher,Hallegraeff, Gustaaf M. (2023) Coccolithophore assemblage changes over the past 9 kyrs BP from a climate hotspot in Tasmania, southeast Australia. Marine Micropaleontology 179 pp102209-. 10.1016/j.marmicro.2023.102209
- Paine, Bradley,Armbrecht, Linda,Bolch, Christopher,McMinn, Andrew,Hallegraeff, Gustaaf M. (2023) Dinoflagellate cyst distribution over the past 9 kyrs BP from offshore east Tasmania, southeast Australia. Palynology pp-. 10.1080/01916122.2023.2273267
Preprint
- Linda Armbrecht, Bradley Paine, Christopher J.S. Bolch, Alan Cooper, Andrew McMinn, Craig Woodward, Gustaaf Hallegraeff (2021) Ancient DNA and microfossils reveal dynamics of three harmful dinoflagellate species off Eastern Tasmania, Australia, over the last 9,000 years. bioRxiv 10.1101/2021.02.18.431790
Search for publications, reports and datasets from this and other voyages
Data publishing
This is a list of online datasets hosted by CSIRO. Other processed datasets hosted by collaborating organisations may be found on the 'Metadata' or "Reports, Publications and Maps' tab.
Use the Get data link on the right to extract data using the NCMI Data Trawler.
Data Stream | Data Summary | Get data | ||||||||||||||
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ADCP Data |
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Get Data from Trawler ADCP Data (NetCDF os75nb and wh150) Overview of the ADCP OS75 Dataset (Zipped HTML) Overview of the ADCP WH150 Dataset (Zipped HTML) |
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Marine biodiversity observations and/or samples |
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Get Data from Trawler |
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Gravity Measurements |
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Get Data from Trawler Geophysical Survey and Mapping acquisition report |
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Multibeam echosounder |
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Get Data from Trawler |
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pCO2 |
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External link - download datafile at IMOS Data fields and units document (.pdf) |
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Radon measurements |
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Get Data from Trawler Download RV Investigator Radon dataset (XLSX) |
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Sub-bottom profiler |
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Get Data from Trawler Geophysical Survey and Mapping data acquisition and processing report |
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Singlebeam echosounder |
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Get Data from Trawler Geophysical Survey and Mapping acquisition report |
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Towed CTD |
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Get Data from Trawler Download the along-track Triaxus Data (NetCDF format) Download plots associated with the Triaxus Processing Report Download vertical-cast Triaxus Data (NetCDF format) |
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Underway |
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Get Data from Trawler Download the 10-second Underway data (CSV format; XX.X MB) Download the 5 minute Underway data (CSV format; X.X MB) Download the 5 second Underway data (NetCDF format; XXX.X MB) Download the 5 second Underway data (CSV format) |
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XBT Profile |
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Get Data from Trawler Geophysical Survey and Mapping data acquisition and processing report |
ID | When (UTC) | Lat | Long | Instrument | Identifier | Action | Log | Subject / Comment |
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Deployments by start time:- Click on column header to sort. Use link on 'Deployment' to see full details. Use the CSV button at the bottom to export data (tab delimited).
Search for deployments from this voyage and others
Deployment | Operation | Station | Cast | Gear | Project | Start and end times | Start Location | End Location | Depth range | Max Depth | Description | |||
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Underway System [details] | Altimeter-163,Burket Flow meter,Burket Flow meter,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO Hobart pCO2,CSIRO air sampling inlet,CSIRO air sampling inlet,Chelsea Tech Fluorometer,Gyrocompass,Humidity Sensor-HMT333,Humidity Sensor-HMT333,Humidity Sensor-HMT333,Humidity Sensor-HMT333,IMOS Port Pyranometer-SN 29125F3,IMOS Port Radiometer-SN 29140F3,IMOS Stbd Pyranometer-SN 29125F3,IMOS Stbd Radiometer-SN 29140F3,IMOS wind monitor,IMOS wind monitor,IMOS wind monitor,IMOS wind monitor,ISAR SST,Kobold MIK-C Flow meter,Kongsberg Maritime Skipper DL850 doppler log,Kongsberg Maritime Skipper DL850 doppler log,Kongsberg Maritime Skipper DL850 doppler log,Kongsberg Maritime Skipper DL850 doppler log,Kongsberg Maritime Skipper DL850 doppler log,Kongsberg Maritime Skipper DL850 doppler log,LI-COR LI-190 Quantum Sensor,LI-COR LI-190 Quantum Sensor,Multiangle Absorption Photometer (MAAP),Multiangle Absorption Photometer (MAAP),Ozone Monitor RVT1,Ozone Monitor RVT1,Ozone Monitor RVT2,Ozone Monitor RVT2,Picarro Greenhouse Gas Spectrometer CO2,CH4,H2o,Picarro Greenhouse Gas Spectrometer CO2,CH4,H2o,Picarro Greenhouse Gas Spectrometer CO2,CH4,H2o,Port drop keel sensor,RM Young 05106 wind monitor-SN 82705,RM Young Wind Sensor Type 05107,RM Young Wind Sensor Type 05107,RM Young Wind Sensor Type 05107,RM Young Wind Sensor Type 05107,RM Young Wind Sensor Type 05108,RM Young Wind Sensor Type 05108,RM Young Wind Sensor Type 05108,RM Young Wind Sensor Type 05108,Remote Temperature (T) - SN 671,Seapath 330+,Seapath 330+,Seapath 330+,Simrad EK60 multi-frequency split-beam echosounder,Starboard drop keel sensor,ThermoSalinoGraph (TSG)-SN 3439,ThermoSalinoGraph (TSG)-SS-SN 1777,Vaisala Ship's Barometer PTB330 | 2465 | 2018-05-13 22:04 | 2018-05-20 22:26 | -27.4413 | 153.0682 | -42.8864 | 147.3388 | ||||||
ADCP Data [details] | Teledyne RDI ADCP 75 kHz,WHS 150-I-1 ADCP | 2465 | 2018-05-14 13:56 | 2018-05-21 06:43 | -26.7387 | 153.2451 | -42.9648 | 147.3763 | 893.9 | |||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-15 13:13 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-15 19:13 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-15 21:58 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-16 01:00 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-16 03:58 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-16 07:05 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-16 08:57 | 1100.3 | ||||||||||
Towed CTD [details] | 1 | Triaxus | 2018-05-16 20:27 | 2018-05-17 00:30 | -34.1966 | 151.4495 | -34.4887 | 151.9795 | 246.7 | Leg 1 | ||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-16 21:04 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-16 22:07 | 169.8 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-16 22:11 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-16 23:04 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 00:01 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 01:07 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 02:59 | 1030.3 | ||||||||||
Towed CTD [details] | 2 | Triaxus | 2018-05-17 03:27 | 2018-05-17 18:12 | -34.6798 | 152.1793 | -36.4736 | 152.5000 | 248 | Leg 2Leg1 | ||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 04:10 | 1092.6 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 05:07 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 06:05 | 1027.9 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 07:00 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 08:03 | 1005.8 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 09:05 | 1020.1 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 10:02 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 11:04 | 1043.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 12:05 | 1017.7 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 13:02 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 13:59 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 15:04 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 16:03 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 17:00 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 18:01 | 1100.3 | ||||||||||
Towed CTD [details] | 2 | Triaxus | 2018-05-17 18:19 | 2018-05-18 02:32 | -36.5036 | 152.4988 | -37.4307 | 152.1652 | 248 | Leg 2Leg2 | ||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 19:00 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 20:03 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 21:02 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 22:01 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 22:58 | 845.8 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-17 23:02 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 00:03 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 01:00 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 02:07 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 03:10 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 04:03 | 1022.5 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 05:04 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 06:02 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 07:27 | 676.5 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 07:30 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 08:07 | 463.7 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 08:11 | 1032 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 09:02 | 1011.2 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 09:58 | 1055.2 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 11:03 | 1043.9 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 11:58 | 998.6 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 13:06 | 1015.9 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 14:08 | 1071.8 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 15:04 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 16:05 | 1087.8 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 17:07 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 18:11 | 1038.6 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 19:01 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 19:06 | 898.7 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 20:06 | 1023.1 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 21:05 | 799.4 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 21:08 | 1081.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 22:08 | 1036.2 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-18 23:01 | 1100.3 | ||||||||||
XBT Cast [details] | Sippican Deep Blue | 2548 | 2018-05-19 00:00 | 1100.3 |