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                  Copyright 1984-2018 The MathWorks, Inc.
                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
To get started, type one of these: helpwin, helpdesk, or demo.
For product information, visit www.mathworks.com.
 
running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :66
[Warning: MATLAB has disabled some advanced graphics rendering features by
switching to software OpenGL. For more information, click here.] 
The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
psst_OC starting job nrtchl at 16-Nov-2025 10:40:13 on oc3-hba

usesats =
          2.00          3.00         18.00         19.00         20.00
Looking for data in range:
05-Nov-2025 23:40:13
15-Nov-2025 23:40:13
ans =
  32x18 char array
    'Forster  SNSW     '
    'Bris3_   Brisbane2'
    'Brisbane2Brisbane2'
    'Bris-Syd Bris-Syd '
    'Syd-Hob  Syd-Hob  '
    'SNSW     SNSW     '
    'LordHoweSLordHoweS'
    'Coffs    Coffs    '
    'Brisbane Brisbane '
    'EGAB     RechEyre '
    'TasE     TasE     '
    'Adelaide Adelaide '
    'Tas      Tas      '
    'CLeeu    CLeeu    '
    'DonPer   DonPer   '
    'Rottnest Rottnest '
    'SAgulfs  SAgulfs  '
    'Ningaloo Ningaloo '
    'Perth    Perth    '
    'NWS      NWS      '
    'AlbEsp   AlbEsp   '
    'RechEyre RechEyre '
    'SGBR     SGBR     '
    'CGBR     CGBR     '
    'NGBR     NGBR     '
    'TimorP   Timor    '
    'XmasI    XmasI    '
    'KimberleyKimberley'
    'Rowley   Kimberley'
    'Dongara  Perth    '
    'Norfolk  LordHoweS'
    'GoC      GOC      '
first read
diroutcomp =
    '/home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/overwritecomp/'
indexcache =
    '/home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/indexcache_v1.mat'
loaded /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/indexcache_v1.mat with chlpcgood for 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00
ditching chlpcgood for 0 files with chl for after 11-Nov-2025 05:20:00
flcache =
    '/home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/flcache2025_v1.mat'
https://mrs-data.csiro.au/thredds/catalog/imos-srs/oc/snpp/1d/2025/catalog.xml
imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc              
                                                                              
https://mrs-data.csiro.au/thredds/catalog/imos-srs/oc/jpss1/1d/2025/catalog.xml
imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc              
                                                                               
updated file list in /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/flcache2025_v1.mat
number of chl files in list: 3453. number in files_u: 636. number not in files_u but are in time window 6
 
loaded /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/overwritecomp/2025111104.mat
reading file 1 of 6: imos-srs/oc/snpp/1d/2025/11/V20251112.L2OC_VIIRS.aust.chl_oci.nc
the array is entirely composed of NaNs
16-Nov-2025 10:40:48 %done=16 ETA: 16-Nov-2025 10:41:43
reading file 2 of 6: imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
/home/vamp1/pub_web/analysis/MODIScomp/2025111204.gif
saved /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/overwritecomp/2025111204.mat
2  64   0  48  18  18  87  45   0
16-Nov-2025 10:44:08 %done=33 ETA: 16-Nov-2025 10:51:10
reading file 3 of 6: imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
16-Nov-2025 10:44:40 %done=50 ETA: 16-Nov-2025 10:48:43
reading file 4 of 6: imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
/home/vamp1/pub_web/analysis/MODIScomp/2025111304.gif
saved /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/overwritecomp/2025111304.mat
1   9   3  16  19   7  54  73  29
16-Nov-2025 10:46:49 %done=66 ETA: 16-Nov-2025 10:49:55
reading file 5 of 6: imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
16-Nov-2025 10:47:25 %done=83 ETA: 16-Nov-2025 10:48:46
reading file 6 of 6: imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
/home/vamp1/pub_web/analysis/MODIScomp/2025111404.gif
saved /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/overwritecomp/2025111404.mat
0  14  31  11  22  37  42  20  23
16-Nov-2025 10:49:29 saved /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/indexcache_v1.mat with chlpcgood for 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00
16-Nov-2025 10:49:29 %done=100 ETA: 16-Nov-2025 10:49:29
ls /home/vamp1/pub_web/analysis/MODIScomp//*.gif
mfli =
    'MODIScomp202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh MODIScomp202511.fli 150  2025110104.gif 2025110204.gif 2025110304.gif 2025110404.gif 2025110504.gif 2025110604.gif 2025110704.gif 2025110804.gif 2025110904.gif 2025111004.gif 2025111104.gif 2025111204.gif 2025111304.gif 2025111404.gif
/home/griffin/scripts/fli2videoMC.sh MODIScomp202511.fli 7
16-Nov-2025 10:50:24 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli MODIScomp/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/MODIScomp
rsync took 0.0183mins
 
--2025-11-16 10:50:25--  http://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-10-06T23%3A40%3A13+AND+TIME+%3C%3D+2025-11-15T23%3A40%3A13+AND+TEMP_b+%3D+true
Resolving geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)... 52.63.70.120, 13.211.43.67, 13.236.125.29
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|52.63.70.120|:80... connected.
HTTP request sent, awaiting response... 301 Moved Permanently
Location: https://geoserver-123.aodn.org.au:443/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-10-06T23%3A40%3A13+AND+TIME+%3C%3D+2025-11-15T23%3A40%3A13+AND+TEMP_b+%3D+true [following]
--2025-11-16 10:50:26--  https://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-10-06T23%3A40%3A13+AND+TIME+%3C%3D+2025-11-15T23%3A40%3A13+AND+TEMP_b+%3D+true
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|52.63.70.120|:443... connected.
HTTP request sent, awaiting response... 200 
Length: unspecified [text/csv]
Saving to: ‘/tmp/tp08173a91_5b53_43e2_8ab7_130d09270354.csv’


          /tmp/tp08     [<=>                 ]       0  --.-KB/s               
         /tmp/tp081     [ <=>                ]   1.55M  7.66MB/s               
        /tmp/tp0817     [  <=>               ]   2.89M  7.16MB/s               
       /tmp/tp08173     [   <=>              ]   4.18M  6.94MB/s               
      /tmp/tp08173a     [    <=>             ]   5.56M  6.91MB/s               
     /tmp/tp08173a9     [     <=>            ]   6.90M  6.86MB/s               
    /tmp/tp08173a91     [      <=>           ]   8.31M  6.89MB/s               
   /tmp/tp08173a91_     [       <=>          ]   9.70M  6.89MB/s               
  /tmp/tp08173a91_5     [        <=>         ]  11.04M  6.87MB/s               
 /tmp/tp08173a91_5b     [         <=>        ]  12.44M  6.88MB/s               
/tmp/tp08173a91_5b5     [          <=>       ]  13.80M  6.87MB/s               
tmp/tp08173a91_5b53     [           <=>      ]  15.20M  6.88MB/s               
mp/tp08173a91_5b53_     [            <=>     ]  16.54M  6.87MB/s               
p/tp08173a91_5b53_4     [             <=>    ]  17.86M  6.84MB/s               
/tp08173a91_5b53_43     [              <=>   ]  19.21M  6.84MB/s               
tp08173a91_5b53_43e     [               <=>  ]  20.62M  6.85MB/s               
p08173a91_5b53_43e2     [                <=> ]  21.99M  6.79MB/s               
08173a91_5b53_43e2_     [                 <=>]  23.34M  6.79MB/s               
8173a91_5b53_43e2_8     [                <=> ]  24.70M  6.80MB/s               
173a91_5b53_43e2_8a     [               <=>  ]  26.04M  6.79MB/s               
73a91_5b53_43e2_8ab     [              <=>   ]  27.40M  6.80MB/s               
3a91_5b53_43e2_8ab7     [             <=>    ]  28.75M  6.79MB/s               
/tmp/tp08173a91_5b5     [            <=>     ]  29.68M  6.78MB/s    in 4.4s    

2025-11-16 10:50:35 (6.81 MB/s) - ‘/tmp/tp08173a91_5b53_43e2_8ab7_130d09270354.csv’ saved [31125082]

FINISHED --2025-11-16 10:50:35--
Total wall clock time: 9.0s
Downloaded: 1 files, 30M in 4.4s (6.81 MB/s)
SOOP dates, sst, lat, lon, latf, lonf
1 07-Oct 00Z - 14-Nov 23Z, 26.7       30.8     -16.93     -10.17      132.1      147.2     -16.87     -16.46      145.7      147.2
2 07-Oct 00Z - 14-Nov 23Z, 18.6       28.3      32.69      35.65      126.5      139.8      32.69      34.68      126.5      135.2
3 06-Oct 23Z - 13-Nov 23Z, 17.73      22.04        -32     -31.82      115.5      115.7     -31.97     -31.83      115.6      115.7
4 07-Oct 00Z - 14-Nov 23Z, 27.5       30.9     -11.04      -9.21      141.9        144     -10.85      -9.22      142.2        144
5 07-Oct 00Z - 14-Nov 23Z, 13.1       30.6     -39.28      13.08      100.7      153.8      -36.5     -18.43      146.6      153.8
6 07-Oct 23Z - 13-Nov 23Z, 23.28      35.35     -23.93     -16.11      145.5      152.7     -22.14     -19.19      146.8      152.7
7 06-Oct 23Z - 13-Nov 23Z, 23.38      32.42     -21.96     -13.59      113.9      123.7     -21.96     -16.02      113.9      123.6
8 07-Oct 00Z - 14-Nov 23Z, 12       17.8     -41.18     -38.08      144.4      146.4     -41.18     -38.08      144.4      146.4
 
reading ACORN data at 16-Nov-2025 10:50:37
                                          
             
ROT _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheROT_non-QC2025.mat                           
had 2200 records from 23-Jul-2025 06:30:00 to 15-Nov-2025 20:00:00 = 79% complete for period
             
SAG _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheSAG_non-QC2025.mat                           
had 4069 records from 12-Mar-2025 00:30:00 to 15-Nov-2025 18:30:00 = 68% complete for period
              
NEWC _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2025.mat                          
had 2883 records from 11-Jun-2025 07:00:00 to 15-Nov-2025 20:00:00 = 76% complete for period
              
TURQ _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2025.mat                          
had 5843 records from 07-Jan-2025 11:00:00 to 15-Nov-2025 21:00:00 = 78% complete for period
              
CORL _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCORL_non-QC2025.mat                          
had 5815 records from 07-Jan-2025 11:00:00 to 15-Nov-2025 21:00:00 = 78% complete for period
             
NWA _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2025.mat                           
had 5326 records from 01-Jan-2025 00:30:00 to 15-Nov-2025 21:30:00 = 70% complete for period
             
COF _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCOF_non-QC2025.mat                           
had 5255 records from 27-Mar-2025 02:30:00 to 15-Nov-2025 15:30:00 = 94% complete for period
Finished reading ACORN data at 16-Nov-2025 10:50:47
                                                   
reading 11 drifter files
interpolating 0 drifters
getting nrt Argo
Found 215 profiles
                                                                                       
loaded Argo data for 215 profiles, spanning 01-Nov-2025 02:05:36 - 15-Nov-2025 03:52:10
                                                                                       
Reading 237 MNF files and binning at 15-min intervals
Found 948 ship data points in lat, lon range-27  -21  153  154 from 06-Nov-2025 00:08:30 to 15-Nov-2025 22:53:30
count, min, max, median SST: 937   22   28   27
glf =
    'nrt_all_v8'
gltypes =
  1x2 cell array
    {'seaglider'}    {'slocum_glider'}
update from thredds?: 0
loaded data for 61 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/nrt_all_v8. Last10:
PortLincoln20250529  57 17-Jun-2025 10:33:31 
TwoRocks20250515     1 24-May-2025 05:37:11 
Portland20250522     1 22-May-2025 18:35:29 
Forster20250507      75 02-Jun-2025 18:38:13 
BassStrait20250501   52 19-May-2025 10:34:34 
Ningaloo20250402     42 16-Apr-2025 10:34:59 
Esperance20250327    41 10-Apr-2025 10:34:16 
Portland20250312     60 02-Apr-2025 10:34:46 
Onslow20250225       66 19-Mar-2025 18:34:16 
Forster20250225      36 09-Mar-2025 18:34:05 
TwoRocks20250219     91 15-Mar-2025 18:34:56 
        
summary:
Finished reading ANFOG (glider) data at 16-Nov-2025 10:51:14
                                                            
                                                               
Doing region 47 Forster (1/32) starting at 16-Nov-2025 10:51:14
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
seeking earlier data
reading
    'in2023_v06/proc/wh75/contour/wh75'
 
/home/vamp1/sco243/investigator_adcp/in2023_v06/proc/wh75/contour/wh75.nc
Cruise area: 151       158     -38.9     -31.9
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        150.15        155.65        -35.05        -30.35
150.4        0.2      155.4 -34.8        0.2      -30.6
nav 0
CLNAME - "CARS_latest" version being used by default.
[  This warning once per session only  ]
shipstride =
          3.00
region 47 Forster record 1/6 at 16-Nov-2025 10:51:17LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Forster_chl/2025110905.gif
region 47 Forster record 2/6 at 16-Nov-2025 10:51:23LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Forster_chl/2025111104.gif
region 47 Forster record 3/6 at 16-Nov-2025 10:51:31LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Forster_chl/2025111205.gif
region 47 Forster record 4/6 at 16-Nov-2025 10:51:37LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Forster_chl/2025111304.gif
region 47 Forster record 5/6 at 16-Nov-2025 10:51:43LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Forster_chl/2025111305.gif
region 47 Forster record 6/6 at 16-Nov-2025 10:51:50LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Forster_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Forster_chl//*.gif
mfli =
    'Forster_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Forster_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Forster_chl202511.fli 7
16-Nov-2025 10:51:59 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Forster_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Forster_chl
rsync took 0.012mins
 
                                                              
Doing region 46 Bris3_ (2/32) starting at 16-Nov-2025 10:52:00
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 4 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        151.75        156.65        -30.45        -25.75
152        0.2      156.4 -30.2        0.2        -26
nav 0
shipstride =
          3.00
region 46 Bris3_ record 1/4 at 16-Nov-2025 10:52:03LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Bris3__chl/2025111104.gif
region 46 Bris3_ record 2/4 at 16-Nov-2025 10:52:08LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Bris3__chl/2025111205.gif
region 46 Bris3_ record 3/4 at 16-Nov-2025 10:52:13LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Bris3__chl/2025111304.gif
region 46 Bris3_ record 4/4 at 16-Nov-2025 10:52:20LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Bris3__chl/2025111305.gif
ls /home/vamp1/pub_web/analysis/Bris3__chl//*.gif
mfli =
    'Bris3__chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris3__chl202511.fli 150  2025110205.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif
/home/griffin/scripts/fli2videoMC.sh Bris3__chl202511.fli 7
16-Nov-2025 10:52:34 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris3__chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris3__chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Bris3__chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Bris3__chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Bris3__chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Bris3__chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Bris3__chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0368mins
 
                                                                
Doing region 5 Brisbane2 (3/32) starting at 16-Nov-2025 10:52:36
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 4 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        151.35        156.65        -30.25        -23.75
151.6        0.2      156.4 -30        0.2        -24
nav 0
shipstride =
          4.00
region 5 Brisbane2 record 1/4 at 16-Nov-2025 10:52:38LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Brisbane2_chl/2025111104.gif
region 5 Brisbane2 record 2/4 at 16-Nov-2025 10:52:44LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Brisbane2_chl/2025111205.gif
region 5 Brisbane2 record 3/4 at 16-Nov-2025 10:52:49LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Brisbane2_chl/2025111304.gif
region 5 Brisbane2 record 4/4 at 16-Nov-2025 10:52:57LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Brisbane2_chl/2025111305.gif
ls /home/vamp1/pub_web/analysis/Brisbane2_chl//*.gif
mfli =
    'Brisbane2_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Brisbane2_chl202511.fli 150  2025110205.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif
/home/griffin/scripts/fli2videoMC.sh Brisbane2_chl202511.fli 7
16-Nov-2025 10:53:15 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Brisbane2_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Brisbane2_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Brisbane2_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Brisbane2_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Brisbane2_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Brisbane2_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Brisbane2_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.049mins
 
                                                                
Doing region 39 Bris-Syd (4/32) starting at 16-Nov-2025 10:53:18
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        149.95        158.25        -35.05        -26.35
150.2        0.2        158 -34.8        0.2      -26.6
nav 0
shipstride =
          4.00
region 39 Bris-Syd record 1/6 at 16-Nov-2025 10:53:21LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Bris-Syd_chl/2025110905.gif
region 39 Bris-Syd record 2/6 at 16-Nov-2025 10:53:28LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Bris-Syd_chl/2025111104.gif
region 39 Bris-Syd record 3/6 at 16-Nov-2025 10:53:37LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Bris-Syd_chl/2025111205.gif
region 39 Bris-Syd record 4/6 at 16-Nov-2025 10:53:45LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Bris-Syd_chl/2025111304.gif
region 39 Bris-Syd record 5/6 at 16-Nov-2025 10:53:58LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Bris-Syd_chl/2025111305.gif
region 39 Bris-Syd record 6/6 at 16-Nov-2025 10:54:11LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Bris-Syd_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Bris-Syd_chl//*.gif
mfli =
    'Bris-Syd_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris-Syd_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Bris-Syd_chl202511.fli 7
16-Nov-2025 10:54:25 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris-Syd_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris-Syd_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Bris-Syd_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Bris-Syd_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Bris-Syd_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Bris-Syd_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Bris-Syd_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.041mins
 
                                                              
Doing region 1 Syd-Hob (5/32) starting at 16-Nov-2025 10:54:27
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        146.35        157.25        -44.65        -32.35
146.6        0.2        157 -44.4        0.2      -32.6
nav 0
shipstride =
          7.00
region 1 Syd-Hob record 1/6 at 16-Nov-2025 10:54:31LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Syd-Hob_chl/2025110904.gif
region 1 Syd-Hob record 2/6 at 16-Nov-2025 10:54:40LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Syd-Hob_chl/2025111104.gif
region 1 Syd-Hob record 3/6 at 16-Nov-2025 10:54:50LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Syd-Hob_chl/2025111205.gif
region 1 Syd-Hob record 4/6 at 16-Nov-2025 10:55:02LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Syd-Hob_chl/2025111305.gif
region 1 Syd-Hob record 5/6 at 16-Nov-2025 10:55:15LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Syd-Hob_chl/2025111404.gif
region 1 Syd-Hob record 6/6 at 16-Nov-2025 10:55:23LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Syd-Hob_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Syd-Hob_chl//*.gif
mfli =
    'Syd-Hob_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Syd-Hob_chl202511.fli 150  2025110205.gif 2025110904.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111305.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Syd-Hob_chl202511.fli 7
16-Nov-2025 10:55:39 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Syd-Hob_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Syd-Hob_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Syd-Hob_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Syd-Hob_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Syd-Hob_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Syd-Hob_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Syd-Hob_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0448mins
 
                                                           
Doing region 2 SNSW (6/32) starting at 16-Nov-2025 10:55:42
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
looking for AATAMS tag data:
wanted 01-Jan-2025 - 01-Jan-2026, scanning 2025
no tags found
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        148.75        156.25        -38.05        -30.95
149        0.2        156 -37.8        0.2      -31.2
nav 0
shipstride =
          4.00
region 2 SNSW record 1/6 at 16-Nov-2025 10:55:46LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/SNSW_chl/2025110905.gif
region 2 SNSW record 2/6 at 16-Nov-2025 10:55:52LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/SNSW_chl/2025111104.gif
region 2 SNSW record 3/6 at 16-Nov-2025 10:56:00LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/SNSW_chl/2025111205.gif
region 2 SNSW record 4/6 at 16-Nov-2025 10:56:08LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/SNSW_chl/2025111304.gif
region 2 SNSW record 5/6 at 16-Nov-2025 10:56:14LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/SNSW_chl/2025111305.gif
region 2 SNSW record 6/6 at 16-Nov-2025 10:56:24LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/SNSW_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/SNSW_chl//*.gif
mfli =
    'SNSW_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh SNSW_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh SNSW_chl202511.fli 7
16-Nov-2025 10:56:35 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SNSW_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SNSW_chl
rsync took 0.0164mins
 
                                                                
Doing region 3 LordHoweS (7/32) starting at 16-Nov-2025 10:56:36
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        149.35        161.65        -36.65        -29.15
149.6        0.2      161.4 -36.4        0.2      -29.4
nav 0
shipstride =
          5.00
region 3 LordHoweS record 1/6 at 16-Nov-2025 10:56:38LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/LordHoweS_chl/2025110905.gif
region 3 LordHoweS record 2/6 at 16-Nov-2025 10:56:46LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/LordHoweS_chl/2025111104.gif
region 3 LordHoweS record 3/6 at 16-Nov-2025 10:56:58LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/LordHoweS_chl/2025111205.gif
region 3 LordHoweS record 4/6 at 16-Nov-2025 10:57:07LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/LordHoweS_chl/2025111304.gif
region 3 LordHoweS record 5/6 at 16-Nov-2025 10:57:20LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/LordHoweS_chl/2025111305.gif
region 3 LordHoweS record 6/6 at 16-Nov-2025 10:57:35LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/LordHoweS_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/LordHoweS_chl//*.gif
mfli =
    'LordHoweS_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh LordHoweS_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh LordHoweS_chl202511.fli 7
16-Nov-2025 10:57:49 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli LordHoweS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/LordHoweS_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/LordHoweS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/LordHoweS_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/LordHoweS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/LordHoweS_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/LordHoweS_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.089mins
 
                                                             
Doing region 25 Coffs (8/32) starting at 16-Nov-2025 10:57:54
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 4 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        152.15        155.45        -32.05        -28.95
152.4        0.2      155.2 -31.8        0.2      -29.2
nav 0
shipstride =
          2.00
region 25 Coffs record 1/4 at 16-Nov-2025 10:57:57LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Coffs_chl/2025111104.gif
region 25 Coffs record 2/4 at 16-Nov-2025 10:58:02LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Coffs_chl/2025111205.gif
region 25 Coffs record 3/4 at 16-Nov-2025 10:58:06LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Coffs_chl/2025111304.gif
region 25 Coffs record 4/4 at 16-Nov-2025 10:58:12LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Coffs_chl/2025111305.gif
ls /home/vamp1/pub_web/analysis/Coffs_chl//*.gif
mfli =
    'Coffs_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Coffs_chl202511.fli 150  2025110205.gif 2025111104.gif 2025111205.gif 2025111304.gif 2025111305.gif
/home/griffin/scripts/fli2videoMC.sh Coffs_chl202511.fli 7
16-Nov-2025 10:58:24 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Coffs_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Coffs_chl
rsync took 0.0122mins
 
                                                               
Doing region 4 Brisbane (9/32) starting at 16-Nov-2025 10:58:25
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        150.35        159.65        -33.65        -22.35
150.6        0.2      159.4 -33.4        0.2      -22.6
nav 0
shipstride =
          7.00
region 4 Brisbane record 1/6 at 16-Nov-2025 10:58:27LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025110904.gif
region 4 Brisbane record 2/6 at 16-Nov-2025 10:58:34LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025110905.gif
region 4 Brisbane record 3/6 at 16-Nov-2025 10:58:42LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025111104.gif
region 4 Brisbane record 4/6 at 16-Nov-2025 10:58:53LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025111205.gif
region 4 Brisbane record 5/6 at 16-Nov-2025 10:59:02LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025111304.gif
region 4 Brisbane record 6/6 at 16-Nov-2025 10:59:20LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025111305.gif
ls /home/vamp1/pub_web/analysis/Brisbane_chl//*.gif
mfli =
    'Brisbane_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Brisbane_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif
/home/griffin/scripts/fli2videoMC.sh Brisbane_chl202511.fli 7
16-Nov-2025 10:59:47 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Brisbane_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Brisbane_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Brisbane_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Brisbane_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Brisbane_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Brisbane_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Brisbane_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0931mins
 
                                                             
Doing region 36 EGAB (10/32) starting at 16-Nov-2025 10:59:53
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 8 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        127.55        138.25        -37.45        -30.75
127.8        0.2        138 -37.2        0.2        -31
nav 0
shipstride =
          5.00
region 36 EGAB record 1/8 at 16-Nov-2025 10:59:56LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025110904.gif
region 36 EGAB record 2/8 at 16-Nov-2025 11:00:02LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025110905.gif
region 36 EGAB record 3/8 at 16-Nov-2025 11:00:09LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025111104.gif
region 36 EGAB record 4/8 at 16-Nov-2025 11:00:21LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025111205.gif
region 36 EGAB record 5/8 at 16-Nov-2025 11:00:32LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025111304.gif
region 36 EGAB record 6/8 at 16-Nov-2025 11:00:42LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025111305.gif
region 36 EGAB record 7/8 at 16-Nov-2025 11:00:53LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025111404.gif
region 36 EGAB record 8/8 at 16-Nov-2025 11:01:00LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/EGAB_chl//*.gif
mfli =
    'EGAB_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh EGAB_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh EGAB_chl202511.fli 7
16-Nov-2025 11:01:31 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli EGAB_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/EGAB_chl
rsync took 0.0133mins
 
                                                             
Doing region 38 TasE (11/32) starting at 16-Nov-2025 11:01:32
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 7 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        143.75        153.65        -46.25        -39.35
144        0.2      153.4 -46        0.2      -39.6
nav 0
shipstride =
          3.00
region 38 TasE record 1/7 at 16-Nov-2025 11:01:37LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025110904.gif
region 38 TasE record 2/7 at 16-Nov-2025 11:01:50LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025110905.gif
region 38 TasE record 3/7 at 16-Nov-2025 11:02:01LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025111104.gif
region 38 TasE record 4/7 at 16-Nov-2025 11:02:11LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025111205.gif
region 38 TasE record 5/7 at 16-Nov-2025 11:02:19LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025111305.gif
region 38 TasE record 6/7 at 16-Nov-2025 11:02:27LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025111404.gif
region 38 TasE record 7/7 at 16-Nov-2025 11:02:37LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/TasE_chl//*.gif
mfli =
    'TasE_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh TasE_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111305.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh TasE_chl202511.fli 7
16-Nov-2025 11:02:53 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli TasE_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/TasE_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/TasE_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/TasE_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/TasE_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/TasE_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/TasE_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0634mins
 
                                                                
Doing region 6 Adelaide (12/32) starting at 16-Nov-2025 11:02:57
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 7 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        134.35        147.65        -44.65        -32.35
134.6        0.2      147.4 -44.4        0.2      -32.6
nav 0
shipstride =
          8.00
region 6 Adelaide record 1/7 at 16-Nov-2025 11:03:01LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025110904.gif
region 6 Adelaide record 2/7 at 16-Nov-2025 11:03:11LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025110905.gif
region 6 Adelaide record 3/7 at 16-Nov-2025 11:03:24LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025111104.gif
region 6 Adelaide record 4/7 at 16-Nov-2025 11:03:36LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025111304.gif
region 6 Adelaide record 5/7 at 16-Nov-2025 11:03:53LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025111305.gif
region 6 Adelaide record 6/7 at 16-Nov-2025 11:04:08LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025111404.gif
region 6 Adelaide record 7/7 at 16-Nov-2025 11:04:27LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Adelaide_chl//*.gif
mfli =
    'Adelaide_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Adelaide_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111304.gif 2025111305.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Adelaide_chl202511.fli 7
16-Nov-2025 11:04:54 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Adelaide_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Adelaide_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Adelaide_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Adelaide_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Adelaide_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Adelaide_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Adelaide_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0609mins
 
                                                            
Doing region 14 Tas (13/32) starting at 16-Nov-2025 11:04:57
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 7 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        140.35        152.65        -47.65        -39.35
140.6        0.2      152.4 -47.4        0.2      -39.6
nav 0
shipstride =
          5.00
region 14 Tas record 1/7 at 16-Nov-2025 11:05:01LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025110904.gif
region 14 Tas record 2/7 at 16-Nov-2025 11:05:17LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025110905.gif
region 14 Tas record 3/7 at 16-Nov-2025 11:05:29LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025111104.gif
region 14 Tas record 4/7 at 16-Nov-2025 11:05:40LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025111205.gif
region 14 Tas record 5/7 at 16-Nov-2025 11:05:50LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025111304.gif
region 14 Tas record 6/7 at 16-Nov-2025 11:05:57LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025111404.gif
region 14 Tas record 7/7 at 16-Nov-2025 11:06:11LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Tas_chl//*.gif
mfli =
    'Tas_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Tas_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Tas_chl202511.fli 7
16-Nov-2025 11:06:32 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Tas_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Tas_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Tas_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Tas_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Tas_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Tas_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Tas_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.077mins
 
                                                              
Doing region 24 CLeeu (14/32) starting at 16-Nov-2025 11:06:37
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 7 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        109.35        118.45        -38.65        -29.35
109.6        0.2      118.2 -38.4        0.2      -29.6
nav 0
shipstride =
          6.00
region 24 CLeeu record 1/7 at 16-Nov-2025 11:06:42LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025110904.gif
region 24 CLeeu record 2/7 at 16-Nov-2025 11:06:57LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025110905.gif
region 24 CLeeu record 3/7 at 16-Nov-2025 11:07:13LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025111104.gif
region 24 CLeeu record 4/7 at 16-Nov-2025 11:07:21LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025111304.gif
region 24 CLeeu record 5/7 at 16-Nov-2025 11:07:29LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025111305.gif
region 24 CLeeu record 6/7 at 16-Nov-2025 11:07:37LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025111404.gif
region 24 CLeeu record 7/7 at 16-Nov-2025 11:07:48LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/CLeeu_chl//*.gif
mfli =
    'CLeeu_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh CLeeu_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111304.gif 2025111305.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh CLeeu_chl202511.fli 7
16-Nov-2025 11:08:09 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli CLeeu_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/CLeeu_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/CLeeu_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/CLeeu_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/CLeeu_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/CLeeu_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/CLeeu_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0413mins
 
                                                               
Doing region 26 DonPer (15/32) starting at 16-Nov-2025 11:08:11
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 5 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        111.35        116.85        -33.85        -29.35
111.6        0.2      116.6 -33.6        0.2      -29.6
nav 0
shipstride =
          3.00
region 26 DonPer record 1/5 at 16-Nov-2025 11:08:15LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/DonPer_chl/2025110904.gif
region 26 DonPer record 2/5 at 16-Nov-2025 11:08:23LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/DonPer_chl/2025110905.gif
region 26 DonPer record 3/5 at 16-Nov-2025 11:08:31LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/DonPer_chl/2025111304.gif
region 26 DonPer record 4/5 at 16-Nov-2025 11:08:37LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/DonPer_chl/2025111404.gif
region 26 DonPer record 5/5 at 16-Nov-2025 11:08:43LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/DonPer_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/DonPer_chl//*.gif
mfli =
    'DonPer_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh DonPer_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111105.gif 2025111304.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh DonPer_chl202511.fli 7
16-Nov-2025 11:08:53 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli DonPer_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/DonPer_chl
rsync took 0.013mins
 
                                                                 
Doing region 35 Rottnest (16/32) starting at 16-Nov-2025 11:08:53
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 5 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        113.75        116.45        -33.25        -30.75
114        0.2      116.2 -33        0.2        -31
nav 0
shipstride =
          1.00
region 35 Rottnest record 1/5 at 16-Nov-2025 11:08:56LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Rottnest_chl/2025110904.gif
region 35 Rottnest record 2/5 at 16-Nov-2025 11:09:01LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Rottnest_chl/2025110905.gif
region 35 Rottnest record 3/5 at 16-Nov-2025 11:09:07LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Rottnest_chl/2025111304.gif
region 35 Rottnest record 4/5 at 16-Nov-2025 11:09:11LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Rottnest_chl/2025111404.gif
region 35 Rottnest record 5/5 at 16-Nov-2025 11:09:16LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Rottnest_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Rottnest_chl//*.gif
mfli =
    'Rottnest_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Rottnest_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111105.gif 2025111304.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Rottnest_chl202511.fli 7
16-Nov-2025 11:09:26 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Rottnest_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Rottnest_chl
rsync took 0.0124mins
 
                                                                
Doing region 23 SAgulfs (17/32) starting at 16-Nov-2025 11:09:27
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 8 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        133.35        141.85        -40.25        -33.55
133.6        0.2      141.6 -40        0.2      -33.8
nav 0
shipstride =
          4.00
region 23 SAgulfs record 1/8 at 16-Nov-2025 11:09:31LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
region 23 SAgulfs record 2/8 at 16-Nov-2025 11:09:36LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
region 23 SAgulfs record 3/8 at 16-Nov-2025 11:09:41LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/SAgulfs_chl/2025111104.gif
region 23 SAgulfs record 4/8 at 16-Nov-2025 11:09:49LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/SAgulfs_chl/2025111205.gif
region 23 SAgulfs record 5/8 at 16-Nov-2025 11:09:57LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/SAgulfs_chl/2025111304.gif
region 23 SAgulfs record 6/8 at 16-Nov-2025 11:10:04LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/SAgulfs_chl/2025111305.gif
region 23 SAgulfs record 7/8 at 16-Nov-2025 11:10:11LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/SAgulfs_chl/2025111404.gif
region 23 SAgulfs record 8/8 at 16-Nov-2025 11:10:19LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/SAgulfs_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/SAgulfs_chl//*.gif
mfli =
    'SAgulfs_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh SAgulfs_chl202511.fli 150  2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh SAgulfs_chl202511.fli 7
16-Nov-2025 11:10:32 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SAgulfs_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SAgulfs_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/SAgulfs_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/SAgulfs_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/SAgulfs_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/SAgulfs_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/SAgulfs_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0385mins
 
                                                                
Doing region 7 Ningaloo (18/32) starting at 16-Nov-2025 11:10:34
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 7 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        109.35        117.65        -27.65        -19.35
109.6        0.2      117.4 -27.4        0.2      -19.6
nav 0
shipstride =
          6.00
region 7 Ningaloo record 1/7 at 16-Nov-2025 11:10:37LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025110904.gif
region 7 Ningaloo record 2/7 at 16-Nov-2025 11:10:47LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025110905.gif
region 7 Ningaloo record 3/7 at 16-Nov-2025 11:10:57LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025111104.gif
region 7 Ningaloo record 4/7 at 16-Nov-2025 11:11:03LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025111205.gif
region 7 Ningaloo record 5/7 at 16-Nov-2025 11:11:09LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025111304.gif
region 7 Ningaloo record 6/7 at 16-Nov-2025 11:11:16LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025111404.gif
region 7 Ningaloo record 7/7 at 16-Nov-2025 11:11:24LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Ningaloo_chl//*.gif
mfli =
    'Ningaloo_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Ningaloo_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Ningaloo_chl202511.fli 7
16-Nov-2025 11:11:38 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Ningaloo_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Ningaloo_chl
rsync took 0.0153mins
 
                                                             
Doing region 8 Perth (19/32) starting at 16-Nov-2025 11:11:39
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 5 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        108.55        117.45        -35.45        -25.35
108.8        0.2      117.2 -35.2        0.2      -25.6
nav 0
shipstride =
          7.00
region 8 Perth record 1/5 at 16-Nov-2025 11:11:43LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Perth_chl/2025110904.gif
region 8 Perth record 2/5 at 16-Nov-2025 11:11:56LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Perth_chl/2025110905.gif
region 8 Perth record 3/5 at 16-Nov-2025 11:12:10LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Perth_chl/2025111304.gif
region 8 Perth record 4/5 at 16-Nov-2025 11:12:18LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Perth_chl/2025111404.gif
region 8 Perth record 5/5 at 16-Nov-2025 11:12:28LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Perth_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Perth_chl//*.gif
mfli =
    'Perth_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Perth_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111105.gif 2025111304.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Perth_chl202511.fli 7
16-Nov-2025 11:12:43 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Perth_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Perth_chl
rsync took 0.0129mins
 
                                                           
Doing region 9 NWS (20/32) starting at 16-Nov-2025 11:12:43
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 8 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        111.35        119.65        -24.25        -17.35
111.6        0.2      119.4 -24        0.2      -17.6
nav 0
shipstride =
          4.00
region 9 NWS record 1/8 at 16-Nov-2025 11:12:47LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025110904.gif
region 9 NWS record 2/8 at 16-Nov-2025 11:12:59LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025110905.gif
region 9 NWS record 3/8 at 16-Nov-2025 11:13:12LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025111104.gif
region 9 NWS record 4/8 at 16-Nov-2025 11:13:22LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025111205.gif
region 9 NWS record 5/8 at 16-Nov-2025 11:13:31LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025111304.gif
region 9 NWS record 6/8 at 16-Nov-2025 11:13:38LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
region 9 NWS record 7/8 at 16-Nov-2025 11:13:43LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025111404.gif
region 9 NWS record 8/8 at 16-Nov-2025 11:13:52LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
ls /home/vamp1/pub_web/analysis/NWS_chl//*.gif
mfli =
    'NWS_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh NWS_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111404.gif
/home/griffin/scripts/fli2videoMC.sh NWS_chl202511.fli 7
16-Nov-2025 11:14:04 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli NWS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/NWS_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/NWS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/NWS_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/NWS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/NWS_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/NWS_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0361mins
 
                                                               
Doing region 15 AlbEsp (21/32) starting at 16-Nov-2025 11:14:06
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 7 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        113.35        125.65        -39.25        -32.35
113.6        0.2      125.4 -39        0.2      -32.6
nav 0
shipstride =
          6.00
region 15 AlbEsp record 1/7 at 16-Nov-2025 11:14:10LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025110904.gif
region 15 AlbEsp record 2/7 at 16-Nov-2025 11:14:20LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025110905.gif
region 15 AlbEsp record 3/7 at 16-Nov-2025 11:14:31LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025111104.gif
region 15 AlbEsp record 4/7 at 16-Nov-2025 11:14:40LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025111205.gif
region 15 AlbEsp record 5/7 at 16-Nov-2025 11:14:48LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025111305.gif
region 15 AlbEsp record 6/7 at 16-Nov-2025 11:14:54LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025111404.gif
region 15 AlbEsp record 7/7 at 16-Nov-2025 11:15:02LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/AlbEsp_chl//*.gif
mfli =
    'AlbEsp_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh AlbEsp_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111305.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh AlbEsp_chl202511.fli 7
16-Nov-2025 11:15:22 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli AlbEsp_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/AlbEsp_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/AlbEsp_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/AlbEsp_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/AlbEsp_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/AlbEsp_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/AlbEsp_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0734mins
 
                                                                 
Doing region 16 RechEyre (22/32) starting at 16-Nov-2025 11:15:26
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 8 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        123.35        137.25        -38.85        -30.75
123.6        0.2        137 -38.6        0.2        -31
nav 0
shipstride =
          7.00
region 16 RechEyre record 1/8 at 16-Nov-2025 11:15:28LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025110904.gif
region 16 RechEyre record 2/8 at 16-Nov-2025 11:15:35LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025110905.gif
region 16 RechEyre record 3/8 at 16-Nov-2025 11:15:43LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025111104.gif
region 16 RechEyre record 4/8 at 16-Nov-2025 11:15:57LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025111205.gif
region 16 RechEyre record 5/8 at 16-Nov-2025 11:16:09LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025111304.gif
region 16 RechEyre record 6/8 at 16-Nov-2025 11:16:19LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025111305.gif
region 16 RechEyre record 7/8 at 16-Nov-2025 11:16:32LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025111404.gif
region 16 RechEyre record 8/8 at 16-Nov-2025 11:16:40LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/RechEyre_chl//*.gif
mfli =
    'RechEyre_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh RechEyre_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh RechEyre_chl202511.fli 7
16-Nov-2025 11:16:55 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli RechEyre_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/RechEyre_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/RechEyre_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/RechEyre_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/RechEyre_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/RechEyre_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/RechEyre_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0785mins
 
                                                             
Doing region 20 SGBR (23/32) starting at 16-Nov-2025 11:17:00
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 8 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        148.35        157.65        -26.65        -19.35
148.6        0.2      157.4 -26.4        0.2      -19.6
nav 0
shipstride =
          5.00
region 20 SGBR record 1/8 at 16-Nov-2025 11:17:03LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025110904.gif
region 20 SGBR record 2/8 at 16-Nov-2025 11:17:11LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025110905.gif
region 20 SGBR record 3/8 at 16-Nov-2025 11:17:20LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025111104.gif
region 20 SGBR record 4/8 at 16-Nov-2025 11:17:29LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025111205.gif
region 20 SGBR record 5/8 at 16-Nov-2025 11:17:38LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025111304.gif
region 20 SGBR record 6/8 at 16-Nov-2025 11:17:51LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025111305.gif
region 20 SGBR record 7/8 at 16-Nov-2025 11:18:05LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
region 20 SGBR record 8/8 at 16-Nov-2025 11:18:11LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/SGBR_chl//*.gif
mfli =
    'SGBR_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh SGBR_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh SGBR_chl202511.fli 7
16-Nov-2025 11:18:23 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SGBR_chl
rsync took 0.0152mins
 
                                                             
Doing region 21 CGBR (24/32) starting at 16-Nov-2025 11:18:23
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 7 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        144.35        153.65        -21.85        -13.75
144.6        0.2      153.4 -21.6        0.2        -14
nav 0
shipstride =
          6.00
region 21 CGBR record 1/7 at 16-Nov-2025 11:18:27LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025110904.gif
region 21 CGBR record 2/7 at 16-Nov-2025 11:18:35LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025110905.gif
region 21 CGBR record 3/7 at 16-Nov-2025 11:18:47LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025111104.gif
region 21 CGBR record 4/7 at 16-Nov-2025 11:18:57LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025111205.gif
region 21 CGBR record 5/7 at 16-Nov-2025 11:19:04LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025111304.gif
region 21 CGBR record 6/7 at 16-Nov-2025 11:19:16LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025111305.gif
region 21 CGBR record 7/7 at 16-Nov-2025 11:19:28LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/CGBR_chl//*.gif
mfli =
    'CGBR_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh CGBR_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh CGBR_chl202511.fli 7
16-Nov-2025 11:19:48 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli CGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/CGBR_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/CGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/CGBR_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/CGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/CGBR_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/CGBR_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.048mins
 
                                                             
Doing region 22 NGBR (25/32) starting at 16-Nov-2025 11:19:51
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        140.35        152.25        -15.85         -6.75
140.6        0.2        152 -15.6        0.2         -7
nav 0
shipstride =
          6.00
region 22 NGBR record 1/6 at 16-Nov-2025 11:19:55LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/NGBR_chl/2025110904.gif
region 22 NGBR record 2/6 at 16-Nov-2025 11:20:03LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/NGBR_chl/2025110905.gif
region 22 NGBR record 3/6 at 16-Nov-2025 11:20:12LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/NGBR_chl/2025111104.gif
region 22 NGBR record 4/6 at 16-Nov-2025 11:20:21LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
region 22 NGBR record 5/6 at 16-Nov-2025 11:20:27LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/NGBR_chl/2025111305.gif
region 22 NGBR record 6/6 at 16-Nov-2025 11:20:37LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/NGBR_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/NGBR_chl//*.gif
mfli =
    'NGBR_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh NGBR_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111305.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh NGBR_chl202511.fli 7
16-Nov-2025 11:20:49 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli NGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/NGBR_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/NGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/NGBR_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/NGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/NGBR_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/NGBR_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0794mins
 
                                                               
Doing region 33 TimorP (26/32) starting at 16-Nov-2025 11:20:54
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        121.95        133.25        -15.25         -6.75
122.2        0.2        133 -15        0.2         -7
nav 0
shipstride =
          6.00
region 33 TimorP record 1/3 at 16-Nov-2025 11:20:57LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/TimorP_chl/2025110904.gif
region 33 TimorP record 2/3 at 16-Nov-2025 11:21:09LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/TimorP_chl/2025110905.gif
region 33 TimorP record 3/3 at 16-Nov-2025 11:21:27LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/TimorP_chl/2025111304.gif
ls /home/vamp1/pub_web/analysis/TimorP_chl//*.gif
mfli =
    'TimorP_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh TimorP_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111304.gif
/home/griffin/scripts/fli2videoMC.sh TimorP_chl202511.fli 7
16-Nov-2025 11:21:40 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli TimorP_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/TimorP_chl
rsync took 0.0124mins
 
                                                              
Doing region 28 XmasI (27/32) starting at 16-Nov-2025 11:21:40
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 5 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
         99.35        110.65        -12.65         -4.35
99.6        0.2      110.4 -12.4        0.2       -4.6
nav 0
shipstride =
          6.00
region 28 XmasI record 1/5 at 16-Nov-2025 11:21:43LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/XmasI_chl/2025111205.gif
region 28 XmasI record 2/5 at 16-Nov-2025 11:21:49LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/XmasI_chl/2025111304.gif
region 28 XmasI record 3/5 at 16-Nov-2025 11:21:57LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
region 28 XmasI record 4/5 at 16-Nov-2025 11:22:02LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/XmasI_chl/2025111404.gif
region 28 XmasI record 5/5 at 16-Nov-2025 11:22:10LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/XmasI_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/XmasI_chl//*.gif
mfli =
    'XmasI_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh XmasI_chl202511.fli 150  2025111205.gif 2025111304.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh XmasI_chl202511.fli 7
16-Nov-2025 11:22:28 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli XmasI_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/XmasI_chl
rsync took 0.0143mins
 
                                                                  
Doing region 10 Kimberley (28/32) starting at 16-Nov-2025 11:22:29
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        117.95        127.65        -18.65        -11.15
118.2        0.2      127.4 -18.4        0.2      -11.4
nav 0
shipstride =
          5.00
region 10 Kimberley record 1/6 at 16-Nov-2025 11:22:32LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Kimberley_chl/2025110904.gif
region 10 Kimberley record 2/6 at 16-Nov-2025 11:22:42LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Kimberley_chl/2025110905.gif
region 10 Kimberley record 3/6 at 16-Nov-2025 11:22:54LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Kimberley_chl/2025111104.gif
region 10 Kimberley record 4/6 at 16-Nov-2025 11:23:05LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Kimberley_chl/2025111205.gif
region 10 Kimberley record 5/6 at 16-Nov-2025 11:23:14LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Kimberley_chl/2025111305.gif
region 10 Kimberley record 6/6 at 16-Nov-2025 11:23:23LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
ls /home/vamp1/pub_web/analysis/Kimberley_chl//*.gif
mfli =
    'Kimberley_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Kimberley_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111305.gif
/home/griffin/scripts/fli2videoMC.sh Kimberley_chl202511.fli 7
16-Nov-2025 11:23:34 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Kimberley_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Kimberley_chl
rsync took 0.0123mins
 
                                                               
Doing region 49 Rowley (29/32) starting at 16-Nov-2025 11:23:34
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        115.35        124.65        -21.65        -13.35
115.6        0.2      124.4 -21.4        0.2      -13.6
nav 0
shipstride =
          5.00
region 49 Rowley record 1/6 at 16-Nov-2025 11:23:38LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025110904.gif
region 49 Rowley record 2/6 at 16-Nov-2025 11:23:48LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025110905.gif
region 49 Rowley record 3/6 at 16-Nov-2025 11:23:58LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025111104.gif
region 49 Rowley record 4/6 at 16-Nov-2025 11:24:11LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025111205.gif
region 49 Rowley record 5/6 at 16-Nov-2025 11:24:24LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025111305.gif
region 49 Rowley record 6/6 at 16-Nov-2025 11:24:34LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025111404.gif
ls /home/vamp1/pub_web/analysis/Rowley_chl//*.gif
mfli =
    'Rowley_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Rowley_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111305.gif 2025111404.gif
/home/griffin/scripts/fli2videoMC.sh Rowley_chl202511.fli 7
16-Nov-2025 11:24:48 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Rowley_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Rowley_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Rowley_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Rowley_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Rowley_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Rowley_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Rowley_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0233mins
 
                                                                
Doing region 50 Dongara (30/32) starting at 16-Nov-2025 11:24:49
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 5 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        110.55        116.25        -30.65        -26.35
110.8        0.2        116 -30.4        0.2      -26.6
nav 0
shipstride =
          3.00
region 50 Dongara record 1/5 at 16-Nov-2025 11:24:53LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Dongara_chl/2025110904.gif
region 50 Dongara record 2/5 at 16-Nov-2025 11:25:00LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Dongara_chl/2025110905.gif
region 50 Dongara record 3/5 at 16-Nov-2025 11:25:07LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Dongara_chl/2025111304.gif
region 50 Dongara record 4/5 at 16-Nov-2025 11:25:12LT, image time: 14-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111404
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Dongara_chl/2025111404.gif
region 50 Dongara record 5/5 at 16-Nov-2025 11:25:18LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Dongara_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Dongara_chl//*.gif
mfli =
    'Dongara_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Dongara_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111105.gif 2025111304.gif 2025111404.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Dongara_chl202511.fli 7
16-Nov-2025 11:25:27 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Dongara_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Dongara_chl
rsync took 0.0124mins
 
                                                                
Doing region 51 Norfolk (31/32) starting at 16-Nov-2025 11:25:28
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 6 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        155.35        171.65        -33.65        -26.35
155.6        0.2      171.4 -33.4        0.2      -26.6
nav 0
shipstride =
          5.00
region 51 Norfolk record 1/6 at 16-Nov-2025 11:25:30LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Norfolk_chl/2025110905.gif
region 51 Norfolk record 2/6 at 16-Nov-2025 11:25:37LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Norfolk_chl/2025111104.gif
region 51 Norfolk record 3/6 at 16-Nov-2025 11:25:44LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/Norfolk_chl/2025111205.gif
region 51 Norfolk record 4/6 at 16-Nov-2025 11:25:54LT, image time: 13-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111304
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Norfolk_chl/2025111304.gif
region 51 Norfolk record 5/6 at 16-Nov-2025 11:26:07LT, image time: 13-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251113.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111305
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251113.mat'
/home/vamp1/pub_web/analysis/Norfolk_chl/2025111305.gif
region 51 Norfolk record 6/6 at 16-Nov-2025 11:26:21LT, image time: 14-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251114.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111405
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251114.mat'
/home/vamp1/pub_web/analysis/Norfolk_chl/2025111405.gif
ls /home/vamp1/pub_web/analysis/Norfolk_chl//*.gif
mfli =
    'Norfolk_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Norfolk_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif 2025111205.gif 2025111304.gif 2025111305.gif 2025111405.gif
/home/griffin/scripts/fli2videoMC.sh Norfolk_chl202511.fli 7
16-Nov-2025 11:26:35 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Norfolk_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Norfolk_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Norfolk_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Norfolk_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Norfolk_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Norfolk_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Norfolk_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0321mins
 
                                                            
Doing region 48 GoC (32/32) starting at 16-Nov-2025 11:26:37
Looking for data in range:
ans =
    '05-Nov-2025 23:40:13'
ans =
    '15-Nov-2025 23:40:13'
chlor_a available 25-May-2022 04:30:00 - 14-Nov-2025 05:20:00(=42h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251113, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
27-Oct-2025 12:00:00
28-Oct-2025 12:00:00
13-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        131.35        143.65        -18.65         -7.35
131.6        0.2      143.4 -18.4        0.2       -7.6
nav 0
shipstride =
          7.00
region 48 GoC record 1/2 at 16-Nov-2025 11:26:39LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/GoC_chl/2025110904.gif
region 48 GoC record 2/2 at 16-Nov-2025 11:26:50LT, image time: 12-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251112.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111205
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251112.mat'
/home/vamp1/pub_web/analysis/GoC_chl/2025111205.gif
ls /home/vamp1/pub_web/analysis/GoC_chl//*.gif
mfli =
    'GoC_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh GoC_chl202511.fli 150  2025110205.gif 2025110904.gif 2025111205.gif
/home/griffin/scripts/fli2videoMC.sh GoC_chl202511.fli 7
16-Nov-2025 11:27:57 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli GoC_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/GoC_chl
rsync took 0.0159mins
 
On the third stroke, it will be 16-Nov-2025 11:27:58
Plotting 32 regions took 0.796h. rsyncing took 1.2mins (0.0374mins/region avg). Thredds retries: 0
\rm /home/vamp1/intranet/cronlogs/DG/psst_chl/202509*.html
\rm /home/vamp1/intranet/cronlogs/DG/psst_chl/202509*.html
1 rm: cannot remove '/home/vamp1/intranet/cronlogs/DG/psst_chl/202509*.html': No such file or directory

finishing at 16-Nov-2025 11:27:58