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                            < M A T L A B (R) >
                  Copyright 1984-2018 The MathWorks, Inc.
                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
To get started, type one of these: helpwin, helpdesk, or demo.
For product information, visit www.mathworks.com.
 
running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :66
[Warning: MATLAB has disabled some advanced graphics rendering features by
switching to software OpenGL. For more information, click here.] 
The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
psst_OC starting job nrtchl at 15-Nov-2025 17:40:13 on oc3-hba

usesats =
          2.00          3.00         18.00         19.00         20.00
Looking for data in range:
05-Nov-2025 06:40:13
15-Nov-2025 06:40:13
ans =
  32x18 char array
    'Forster  SNSW     '
    'Bris3_   Brisbane2'
    'Brisbane2Brisbane2'
    'Bris-Syd Bris-Syd '
    'Syd-Hob  Syd-Hob  '
    'SNSW     SNSW     '
    'LordHoweSLordHoweS'
    'Coffs    Coffs    '
    'Brisbane Brisbane '
    'EGAB     RechEyre '
    'TasE     TasE     '
    'Adelaide Adelaide '
    'Tas      Tas      '
    'CLeeu    CLeeu    '
    'DonPer   DonPer   '
    'Rottnest Rottnest '
    'SAgulfs  SAgulfs  '
    'Ningaloo Ningaloo '
    'Perth    Perth    '
    'NWS      NWS      '
    'AlbEsp   AlbEsp   '
    'RechEyre RechEyre '
    'SGBR     SGBR     '
    'CGBR     CGBR     '
    'NGBR     NGBR     '
    'TimorP   Timor    '
    'XmasI    XmasI    '
    'KimberleyKimberley'
    'Rowley   Kimberley'
    'Dongara  Perth    '
    'Norfolk  LordHoweS'
    'GoC      GOC      '
first read
diroutcomp =
    '/home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/overwritecomp/'
indexcache =
    '/home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/indexcache_v1.mat'
loaded /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/indexcache_v1.mat with chlpcgood for 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00
ditching chlpcgood for 0 files with chl for after 11-Nov-2025 05:20:00
flcache =
    '/home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/flcache2025_v1.mat'
https://mrs-data.csiro.au/thredds/catalog/imos-srs/oc/snpp/1d/2025/catalog.xml
imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc              
                                                                              
https://mrs-data.csiro.au/thredds/catalog/imos-srs/oc/jpss1/1d/2025/catalog.xml
imos-srs/oc/jpss1/1d/2025/11/J20251111.L2OC_VIIRS.aust.chl_oci.nc              
                                                                               
updated file list in /home/vamp1/varney/gri159/IMOScache/CHL/chlor_a_ms2/flcache2025_v1.mat
number of chl files in list: 3453. number in files_u: 630. number not in files_u but are in time window 0
FYI: 
--2025-11-15 17:40:35--  http://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-10-06T06%3A40%3A13+AND+TIME+%3C%3D+2025-11-15T06%3A40%3A13+AND+TEMP_b+%3D+true
Resolving geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)... 13.211.43.67, 13.236.125.29, 52.63.70.120
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|13.211.43.67|:80... connected.
HTTP request sent, awaiting response... 301 Moved Permanently
Location: https://geoserver-123.aodn.org.au:443/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-10-06T06%3A40%3A13+AND+TIME+%3C%3D+2025-11-15T06%3A40%3A13+AND+TEMP_b+%3D+true [following]
--2025-11-15 17:40:35--  https://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-10-06T06%3A40%3A13+AND+TIME+%3C%3D+2025-11-15T06%3A40%3A13+AND+TEMP_b+%3D+true
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|13.211.43.67|:443... connected.
HTTP request sent, awaiting response... 200 
Length: unspecified [text/csv]
Saving to: ‘/tmp/tp2a8488a1_d4d5_440e_834a_3ccc08c78609.csv’


          /tmp/tp2a     [<=>                 ]       0  --.-KB/s               
         /tmp/tp2a8     [ <=>                ]   1.58M  7.92MB/s               
        /tmp/tp2a84     [  <=>               ]   2.98M  7.44MB/s               
       /tmp/tp2a848     [   <=>              ]   4.37M  7.27MB/s               
      /tmp/tp2a8488     [    <=>             ]   5.71M  7.13MB/s               
     /tmp/tp2a8488a     [     <=>            ]   7.06M  7.05MB/s               
    /tmp/tp2a8488a1     [      <=>           ]   8.44M  7.02MB/s               
   /tmp/tp2a8488a1_     [       <=>          ]   9.75M  6.93MB/s               
  /tmp/tp2a8488a1_d     [        <=>         ]  11.14M  6.94MB/s               
 /tmp/tp2a8488a1_d4     [         <=>        ]  12.53M  6.94MB/s               
/tmp/tp2a8488a1_d4d     [          <=>       ]  13.85M  6.90MB/s               
tmp/tp2a8488a1_d4d5     [           <=>      ]  15.25M  6.90MB/s               
mp/tp2a8488a1_d4d5_     [            <=>     ]  16.64M  6.89MB/s               
p/tp2a8488a1_d4d5_4     [             <=>    ]  18.04M  6.90MB/s               
/tp2a8488a1_d4d5_44     [              <=>   ]  19.40M  6.89MB/s               
tp2a8488a1_d4d5_440     [               <=>  ]  20.75M  6.88MB/s               
p2a8488a1_d4d5_440e     [                <=> ]  22.15M  6.82MB/s               
2a8488a1_d4d5_440e_     [                 <=>]  23.55M  6.82MB/s               
a8488a1_d4d5_440e_8     [                <=> ]  24.94M  6.82MB/s               
8488a1_d4d5_440e_83     [               <=>  ]  26.29M  6.82MB/s               
488a1_d4d5_440e_834     [              <=>   ]  27.58M  6.79MB/s               
88a1_d4d5_440e_834a     [             <=>    ]  28.95M  6.80MB/s               
/tmp/tp2a8488a1_d4d     [            <=>     ]  30.08M  6.80MB/s    in 4.4s    

2025-11-15 17:40:44 (6.86 MB/s) - ‘/tmp/tp2a8488a1_d4d5_440e_834a_3ccc08c78609.csv’ saved [31541754]

FINISHED --2025-11-15 17:40:44--
Total wall clock time: 9.3s
Downloaded: 1 files, 30M in 4.4s (6.86 MB/s)
SOOP dates, sst, lat, lon, latf, lonf
1 06-Oct 07Z - 14-Nov 23Z, 26.7       30.8     -16.93     -10.17      130.6      147.2     -16.87     -16.46      145.7      147.2
2 06-Oct 07Z - 14-Nov 23Z, 18.6       28.5      32.69      35.65      126.5      139.8      32.69      34.68      126.5      135.4
3 06-Oct 07Z - 13-Nov 23Z, 17.73      22.04        -32     -31.82      115.5      115.7     -31.97     -31.83      115.6      115.7
4 06-Oct 07Z - 14-Nov 23Z, 27.5       30.9     -11.76      -9.21      141.9        144     -10.85      -9.22      142.2        144
5 06-Oct 07Z - 14-Nov 23Z, 13.1       30.6     -39.28      13.08      100.7      153.8     -39.26     -18.43      146.6      153.8
6 07-Oct 23Z - 13-Nov 23Z, 23.28      35.35     -23.93     -16.11      145.5      152.7     -23.45     -19.19      146.8      152.7
7 06-Oct 06Z - 13-Nov 23Z, 23.38      32.42     -21.96     -13.59      113.9      123.7     -21.96     -16.02      113.9      123.6
8 06-Oct 07Z - 14-Nov 23Z, 12       17.8     -41.18     -38.08      144.4      146.4     -41.18     -38.08      144.4      146.4
 
reading ACORN data at 15-Nov-2025 17:40:46
                                          
             
ROT _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheROT_non-QC2025.mat                           
had 2181 records from 23-Jul-2025 06:30:00 to 15-Nov-2025 01:00:00 = 79% complete for period
             
SAG _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheSAG_non-QC2025.mat                           
had 4056 records from 12-Mar-2025 00:30:00 to 15-Nov-2025 03:30:00 = 68% complete for period
              
NEWC _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2025.mat                          
had 2876 records from 11-Jun-2025 07:00:00 to 15-Nov-2025 03:00:00 = 76% complete for period
              
TURQ _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2025.mat                          
had 5828 records from 07-Jan-2025 11:00:00 to 15-Nov-2025 03:00:00 = 78% complete for period
              
CORL _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCORL_non-QC2025.mat                          
had 5800 records from 07-Jan-2025 11:00:00 to 15-Nov-2025 03:00:00 = 78% complete for period
             
NWA _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2025.mat                           
had 5308 records from 01-Jan-2025 00:30:00 to 15-Nov-2025 03:30:00 = 70% complete for period
             
COF _non-QC 0
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCOF_non-QC2025.mat                           
had 5243 records from 27-Mar-2025 02:30:00 to 15-Nov-2025 03:30:00 = 94% complete for period
Finished reading ACORN data at 15-Nov-2025 17:40:55
                                                   
reading 11 drifter files
interpolating 0 drifters
getting nrt Argo
Found 217 profiles
                                                                                       
loaded Argo data for 217 profiles, spanning 31-Oct-2025 12:49:15 - 14-Nov-2025 04:28:09
                                                                                       
Reading 236 MNF files and binning at 15-min intervals
Found 944 ship data points in lat, lon range-27  -21  153  154 from 05-Nov-2025 07:08:30 to 15-Nov-2025 04:53:30
count, min, max, median SST: 935   22   28   27
glf =
    'nrt_all_v8'
gltypes =
  1x2 cell array
    {'seaglider'}    {'slocum_glider'}
update from thredds?: 0
loaded data for 61 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/nrt_all_v8. Last10:
PortLincoln20250529  57 17-Jun-2025 10:33:31 
TwoRocks20250515     1 24-May-2025 05:37:11 
Portland20250522     1 22-May-2025 18:35:29 
Forster20250507      75 02-Jun-2025 18:38:13 
BassStrait20250501   52 19-May-2025 10:34:34 
Ningaloo20250402     42 16-Apr-2025 10:34:59 
Esperance20250327    41 10-Apr-2025 10:34:16 
Portland20250312     60 02-Apr-2025 10:34:46 
Onslow20250225       66 19-Mar-2025 18:34:16 
Forster20250225      36 09-Mar-2025 18:34:05 
TwoRocks20250219     91 15-Mar-2025 18:34:56 
        
summary:
Finished reading ANFOG (glider) data at 15-Nov-2025 17:41:23
                                                            
                                                               
Doing region 47 Forster (1/32) starting at 15-Nov-2025 17:41:23
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
seeking earlier data
reading
    'in2023_v06/proc/wh75/contour/wh75'
 
/home/vamp1/sco243/investigator_adcp/in2023_v06/proc/wh75/contour/wh75.nc
Cruise area: 151       158     -38.9     -31.9
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        150.15        155.65        -35.05        -30.35
150.4        0.2      155.4 -34.8        0.2      -30.6
nav 0
CLNAME - "CARS_latest" version being used by default.
[  This warning once per session only  ]
shipstride =
          3.00
region 47 Forster record 1/2 at 15-Nov-2025 17:41:28LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Forster_chl/2025110905.gif
region 47 Forster record 2/2 at 15-Nov-2025 17:41:34LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Forster_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Forster_chl//*.gif
mfli =
    'Forster_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Forster_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Forster_chl202511.fli 7
15-Nov-2025 17:41:49 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Forster_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Forster_chl
rsync took 0.0128mins
 
                                                              
Doing region 46 Bris3_ (2/32) starting at 15-Nov-2025 17:41:50
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 1 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        151.75        156.65        -30.45        -25.75
152        0.2      156.4 -30.2        0.2        -26
nav 0
shipstride =
          3.00
region 46 Bris3_ record 1/1 at 15-Nov-2025 17:41:52LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Bris3__chl/2025111104.gif
                                                                
Doing region 5 Brisbane2 (3/32) starting at 15-Nov-2025 17:41:57
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 1 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        151.35        156.65        -30.25        -23.75
151.6        0.2      156.4 -30        0.2        -24
nav 0
shipstride =
          4.00
region 5 Brisbane2 record 1/1 at 15-Nov-2025 17:42:00LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Brisbane2_chl/2025111104.gif
                                                                
Doing region 39 Bris-Syd (4/32) starting at 15-Nov-2025 17:42:06
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        149.95        158.25        -35.05        -26.35
150.2        0.2        158 -34.8        0.2      -26.6
nav 0
shipstride =
          4.00
region 39 Bris-Syd record 1/2 at 15-Nov-2025 17:42:08LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Bris-Syd_chl/2025110905.gif
region 39 Bris-Syd record 2/2 at 15-Nov-2025 17:42:14LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Bris-Syd_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Bris-Syd_chl//*.gif
mfli =
    'Bris-Syd_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris-Syd_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Bris-Syd_chl202511.fli 7
15-Nov-2025 17:42:29 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris-Syd_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris-Syd_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Bris-Syd_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Bris-Syd_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Bris-Syd_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Bris-Syd_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Bris-Syd_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0239mins
 
                                                              
Doing region 1 Syd-Hob (5/32) starting at 15-Nov-2025 17:42:30
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        146.35        157.25        -44.65        -32.35
146.6        0.2        157 -44.4        0.2      -32.6
nav 0
shipstride =
          7.00
region 1 Syd-Hob record 1/2 at 15-Nov-2025 17:42:34LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Syd-Hob_chl/2025110904.gif
region 1 Syd-Hob record 2/2 at 15-Nov-2025 17:42:43LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Syd-Hob_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Syd-Hob_chl//*.gif
mfli =
    'Syd-Hob_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Syd-Hob_chl202511.fli 150  2025110205.gif 2025110904.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Syd-Hob_chl202511.fli 7
15-Nov-2025 17:43:02 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Syd-Hob_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Syd-Hob_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Syd-Hob_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Syd-Hob_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Syd-Hob_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Syd-Hob_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Syd-Hob_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0235mins
 
                                                           
Doing region 2 SNSW (6/32) starting at 15-Nov-2025 17:43:04
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
looking for AATAMS tag data:
wanted 01-Jan-2025 - 01-Jan-2026, scanning 2025
no tags found
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        148.75        156.25        -38.05        -30.95
149        0.2        156 -37.8        0.2      -31.2
nav 0
shipstride =
          4.00
region 2 SNSW record 1/2 at 15-Nov-2025 17:47:10LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/SNSW_chl/2025110905.gif
region 2 SNSW record 2/2 at 15-Nov-2025 17:47:15LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/SNSW_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/SNSW_chl//*.gif
mfli =
    'SNSW_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh SNSW_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh SNSW_chl202511.fli 7
15-Nov-2025 17:47:32 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SNSW_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SNSW_chl
rsync took 0.0156mins
 
                                                                
Doing region 3 LordHoweS (7/32) starting at 15-Nov-2025 17:47:33
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        149.35        161.65        -36.65        -29.15
149.6        0.2      161.4 -36.4        0.2      -29.4
nav 0
shipstride =
          5.00
region 3 LordHoweS record 1/2 at 15-Nov-2025 17:47:35LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/LordHoweS_chl/2025110905.gif
region 3 LordHoweS record 2/2 at 15-Nov-2025 17:47:42LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/LordHoweS_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/LordHoweS_chl//*.gif
mfli =
    'LordHoweS_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh LordHoweS_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh LordHoweS_chl202511.fli 7
15-Nov-2025 17:48:05 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli LordHoweS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/LordHoweS_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/LordHoweS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/LordHoweS_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/LordHoweS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/LordHoweS_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/LordHoweS_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0258mins
 
                                                             
Doing region 25 Coffs (8/32) starting at 15-Nov-2025 17:48:07
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 1 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        152.15        155.45        -32.05        -28.95
152.4        0.2      155.2 -31.8        0.2      -29.2
nav 0
shipstride =
          2.00
region 25 Coffs record 1/1 at 15-Nov-2025 17:48:10LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Coffs_chl/2025111104.gif
                                                               
Doing region 4 Brisbane (9/32) starting at 15-Nov-2025 17:48:15
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        150.35        159.65        -33.65        -22.35
150.6        0.2      159.4 -33.4        0.2      -22.6
nav 0
shipstride =
          7.00
region 4 Brisbane record 1/3 at 15-Nov-2025 17:48:17LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025110904.gif
region 4 Brisbane record 2/3 at 15-Nov-2025 17:48:25LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025110905.gif
region 4 Brisbane record 3/3 at 15-Nov-2025 17:48:33LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Brisbane_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Brisbane_chl//*.gif
mfli =
    'Brisbane_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Brisbane_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Brisbane_chl202511.fli 7
15-Nov-2025 17:48:51 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Brisbane_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Brisbane_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Brisbane_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Brisbane_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Brisbane_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Brisbane_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Brisbane_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0253mins
 
                                                             
Doing region 36 EGAB (10/32) starting at 15-Nov-2025 17:48:52
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        127.55        138.25        -37.45        -30.75
127.8        0.2        138 -37.2        0.2        -31
nav 0
shipstride =
          5.00
region 36 EGAB record 1/3 at 15-Nov-2025 17:48:54LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025110904.gif
region 36 EGAB record 2/3 at 15-Nov-2025 17:49:01LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025110905.gif
region 36 EGAB record 3/3 at 15-Nov-2025 17:49:08LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/EGAB_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/EGAB_chl//*.gif
mfli =
    'EGAB_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh EGAB_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh EGAB_chl202511.fli 7
15-Nov-2025 17:49:28 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli EGAB_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/EGAB_chl
rsync took 0.0126mins
 
                                                             
Doing region 38 TasE (11/32) starting at 15-Nov-2025 17:49:29
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        143.75        153.65        -46.25        -39.35
144        0.2      153.4 -46        0.2      -39.6
nav 0
shipstride =
          3.00
region 38 TasE record 1/3 at 15-Nov-2025 17:49:33LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025110904.gif
region 38 TasE record 2/3 at 15-Nov-2025 17:49:42LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025110905.gif
region 38 TasE record 3/3 at 15-Nov-2025 17:49:53LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/TasE_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/TasE_chl//*.gif
mfli =
    'TasE_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh TasE_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh TasE_chl202511.fli 7
15-Nov-2025 17:50:13 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli TasE_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/TasE_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/TasE_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/TasE_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/TasE_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/TasE_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/TasE_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0238mins
 
                                                                
Doing region 6 Adelaide (12/32) starting at 15-Nov-2025 17:50:15
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        134.35        147.65        -44.65        -32.35
134.6        0.2      147.4 -44.4        0.2      -32.6
nav 0
shipstride =
          8.00
region 6 Adelaide record 1/3 at 15-Nov-2025 17:50:17LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025110904.gif
region 6 Adelaide record 2/3 at 15-Nov-2025 17:50:27LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025110905.gif
region 6 Adelaide record 3/3 at 15-Nov-2025 17:50:38LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Adelaide_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Adelaide_chl//*.gif
mfli =
    'Adelaide_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Adelaide_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Adelaide_chl202511.fli 7
15-Nov-2025 17:50:52 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Adelaide_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Adelaide_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Adelaide_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Adelaide_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Adelaide_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Adelaide_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Adelaide_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0256mins
 
                                                            
Doing region 14 Tas (13/32) starting at 15-Nov-2025 17:50:54
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        140.35        152.65        -47.65        -39.35
140.6        0.2      152.4 -47.4        0.2      -39.6
nav 0
shipstride =
          5.00
region 14 Tas record 1/3 at 15-Nov-2025 17:50:56LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025110904.gif
region 14 Tas record 2/3 at 15-Nov-2025 17:51:06LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025110905.gif
region 14 Tas record 3/3 at 15-Nov-2025 17:51:16LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Tas_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Tas_chl//*.gif
mfli =
    'Tas_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Tas_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Tas_chl202511.fli 7
15-Nov-2025 17:51:39 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Tas_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Tas_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Tas_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Tas_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Tas_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Tas_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Tas_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0239mins
 
                                                              
Doing region 24 CLeeu (14/32) starting at 15-Nov-2025 17:51:41
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        109.35        118.45        -38.65        -29.35
109.6        0.2      118.2 -38.4        0.2      -29.6
nav 0
shipstride =
          6.00
region 24 CLeeu record 1/3 at 15-Nov-2025 17:51:44LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025110904.gif
region 24 CLeeu record 2/3 at 15-Nov-2025 17:51:58LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025110905.gif
region 24 CLeeu record 3/3 at 15-Nov-2025 17:52:12LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/CLeeu_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/CLeeu_chl//*.gif
mfli =
    'CLeeu_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh CLeeu_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh CLeeu_chl202511.fli 7
15-Nov-2025 17:52:25 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli CLeeu_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/CLeeu_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/CLeeu_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/CLeeu_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/CLeeu_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/CLeeu_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/CLeeu_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0243mins
 
                                                               
Doing region 26 DonPer (15/32) starting at 15-Nov-2025 17:52:27
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        111.35        116.85        -33.85        -29.35
111.6        0.2      116.6 -33.6        0.2      -29.6
nav 0
shipstride =
          3.00
region 26 DonPer record 1/2 at 15-Nov-2025 17:52:29LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/DonPer_chl/2025110904.gif
region 26 DonPer record 2/2 at 15-Nov-2025 17:52:36LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/DonPer_chl/2025110905.gif
ls /home/vamp1/pub_web/analysis/DonPer_chl//*.gif
mfli =
    'DonPer_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh DonPer_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh DonPer_chl202511.fli 7
15-Nov-2025 17:52:53 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli DonPer_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/DonPer_chl
rsync took 0.0111mins
 
                                                                 
Doing region 35 Rottnest (16/32) starting at 15-Nov-2025 17:52:54
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        113.75        116.45        -33.25        -30.75
114        0.2      116.2 -33        0.2        -31
nav 0
shipstride =
          1.00
region 35 Rottnest record 1/2 at 15-Nov-2025 17:52:57LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Rottnest_chl/2025110904.gif
region 35 Rottnest record 2/2 at 15-Nov-2025 17:53:02LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Rottnest_chl/2025110905.gif
ls /home/vamp1/pub_web/analysis/Rottnest_chl//*.gif
mfli =
    'Rottnest_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Rottnest_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Rottnest_chl202511.fli 7
15-Nov-2025 17:53:16 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Rottnest_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Rottnest_chl
rsync took 0.0112mins
 
                                                                
Doing region 23 SAgulfs (17/32) starting at 15-Nov-2025 17:53:17
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        133.35        141.85        -40.25        -33.55
133.6        0.2      141.6 -40        0.2      -33.8
nav 0
shipstride =
          4.00
region 23 SAgulfs record 1/3 at 15-Nov-2025 17:53:19LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
region 23 SAgulfs record 2/3 at 15-Nov-2025 17:53:23LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
region 23 SAgulfs record 3/3 at 15-Nov-2025 17:53:28LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/SAgulfs_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/SAgulfs_chl//*.gif
mfli =
    'SAgulfs_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh SAgulfs_chl202511.fli 150  2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh SAgulfs_chl202511.fli 7
15-Nov-2025 17:53:45 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SAgulfs_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SAgulfs_chl
rsync took 0.0111mins
 
                                                                
Doing region 7 Ningaloo (18/32) starting at 15-Nov-2025 17:53:45
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        109.35        117.65        -27.65        -19.35
109.6        0.2      117.4 -27.4        0.2      -19.6
nav 0
shipstride =
          6.00
region 7 Ningaloo record 1/3 at 15-Nov-2025 17:53:47LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025110904.gif
region 7 Ningaloo record 2/3 at 15-Nov-2025 17:53:57LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025110905.gif
region 7 Ningaloo record 3/3 at 15-Nov-2025 17:54:06LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Ningaloo_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Ningaloo_chl//*.gif
mfli =
    'Ningaloo_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Ningaloo_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Ningaloo_chl202511.fli 7
15-Nov-2025 17:54:23 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Ningaloo_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Ningaloo_chl
rsync took 0.0139mins
 
                                                             
Doing region 8 Perth (19/32) starting at 15-Nov-2025 17:54:24
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        108.55        117.45        -35.45        -25.35
108.8        0.2      117.2 -35.2        0.2      -25.6
nav 0
shipstride =
          7.00
region 8 Perth record 1/2 at 15-Nov-2025 17:54:27LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Perth_chl/2025110904.gif
region 8 Perth record 2/2 at 15-Nov-2025 17:54:41LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Perth_chl/2025110905.gif
ls /home/vamp1/pub_web/analysis/Perth_chl//*.gif
mfli =
    'Perth_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Perth_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Perth_chl202511.fli 7
15-Nov-2025 17:55:03 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Perth_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Perth_chl
rsync took 0.0155mins
 
                                                           
Doing region 9 NWS (20/32) starting at 15-Nov-2025 17:55:04
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        111.35        119.65        -24.25        -17.35
111.6        0.2      119.4 -24        0.2      -17.6
nav 0
shipstride =
          4.00
region 9 NWS record 1/3 at 15-Nov-2025 17:55:06LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025110904.gif
region 9 NWS record 2/3 at 15-Nov-2025 17:55:15LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025110905.gif
region 9 NWS record 3/3 at 15-Nov-2025 17:55:25LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/NWS_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/NWS_chl//*.gif
mfli =
    'NWS_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh NWS_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh NWS_chl202511.fli 7
15-Nov-2025 17:55:46 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli NWS_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/NWS_chl
rsync took 0.0132mins
 
                                                               
Doing region 15 AlbEsp (21/32) starting at 15-Nov-2025 17:55:46
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        113.35        125.65        -39.25        -32.35
113.6        0.2      125.4 -39        0.2      -32.6
nav 0
shipstride =
          6.00
region 15 AlbEsp record 1/3 at 15-Nov-2025 17:55:50LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025110904.gif
region 15 AlbEsp record 2/3 at 15-Nov-2025 17:56:01LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025110905.gif
region 15 AlbEsp record 3/3 at 15-Nov-2025 17:56:12LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/AlbEsp_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/AlbEsp_chl//*.gif
mfli =
    'AlbEsp_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh AlbEsp_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh AlbEsp_chl202511.fli 7
15-Nov-2025 17:56:27 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli AlbEsp_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/AlbEsp_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/AlbEsp_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/AlbEsp_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/AlbEsp_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/AlbEsp_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/AlbEsp_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0261mins
 
                                                                 
Doing region 16 RechEyre (22/32) starting at 15-Nov-2025 17:56:29
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        123.35        137.25        -38.85        -30.75
123.6        0.2        137 -38.6        0.2        -31
nav 0
shipstride =
          7.00
region 16 RechEyre record 1/3 at 15-Nov-2025 17:56:31LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025110904.gif
region 16 RechEyre record 2/3 at 15-Nov-2025 17:56:38LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025110905.gif
region 16 RechEyre record 3/3 at 15-Nov-2025 17:56:47LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/RechEyre_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/RechEyre_chl//*.gif
mfli =
    'RechEyre_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh RechEyre_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh RechEyre_chl202511.fli 7
15-Nov-2025 17:57:11 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli RechEyre_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/RechEyre_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/RechEyre_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/RechEyre_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/RechEyre_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/RechEyre_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/RechEyre_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0249mins
 
                                                             
Doing region 20 SGBR (23/32) starting at 15-Nov-2025 17:57:13
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        148.35        157.65        -26.65        -19.35
148.6        0.2      157.4 -26.4        0.2      -19.6
nav 0
shipstride =
          5.00
region 20 SGBR record 1/3 at 15-Nov-2025 17:57:16LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025110904.gif
region 20 SGBR record 2/3 at 15-Nov-2025 17:57:23LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025110905.gif
region 20 SGBR record 3/3 at 15-Nov-2025 17:57:33LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/SGBR_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/SGBR_chl//*.gif
mfli =
    'SGBR_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh SGBR_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh SGBR_chl202511.fli 7
15-Nov-2025 17:57:52 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SGBR_chl
rsync took 0.0127mins
 
                                                             
Doing region 21 CGBR (24/32) starting at 15-Nov-2025 17:57:53
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        144.35        153.65        -21.85        -13.75
144.6        0.2      153.4 -21.6        0.2        -14
nav 0
shipstride =
          6.00
region 21 CGBR record 1/3 at 15-Nov-2025 17:57:55LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025110904.gif
region 21 CGBR record 2/3 at 15-Nov-2025 17:58:03LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025110905.gif
region 21 CGBR record 3/3 at 15-Nov-2025 17:58:14LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/CGBR_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/CGBR_chl//*.gif
mfli =
    'CGBR_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh CGBR_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh CGBR_chl202511.fli 7
15-Nov-2025 17:58:30 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli CGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/CGBR_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/CGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/CGBR_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/CGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/CGBR_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/CGBR_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.022mins
 
                                                             
Doing region 22 NGBR (25/32) starting at 15-Nov-2025 17:58:31
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        140.35        152.25        -15.85         -6.75
140.6        0.2        152 -15.6        0.2         -7
nav 0
shipstride =
          6.00
region 22 NGBR record 1/3 at 15-Nov-2025 17:58:35LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/NGBR_chl/2025110904.gif
region 22 NGBR record 2/3 at 15-Nov-2025 17:58:44LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/NGBR_chl/2025110905.gif
region 22 NGBR record 3/3 at 15-Nov-2025 17:58:54LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/NGBR_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/NGBR_chl//*.gif
mfli =
    'NGBR_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh NGBR_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh NGBR_chl202511.fli 7
15-Nov-2025 17:59:09 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli NGBR_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/NGBR_chl
rsync took 0.0135mins
 
                                                               
Doing region 33 TimorP (26/32) starting at 15-Nov-2025 17:59:10
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        121.95        133.25        -15.25         -6.75
122.2        0.2        133 -15        0.2         -7
nav 0
shipstride =
          6.00
region 33 TimorP record 1/2 at 15-Nov-2025 17:59:13LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/TimorP_chl/2025110904.gif
region 33 TimorP record 2/2 at 15-Nov-2025 17:59:25LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/TimorP_chl/2025110905.gif
ls /home/vamp1/pub_web/analysis/TimorP_chl//*.gif
mfli =
    'TimorP_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh TimorP_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif
/home/griffin/scripts/fli2videoMC.sh TimorP_chl202511.fli 7
15-Nov-2025 17:59:53 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli TimorP_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/TimorP_chl
rsync took 0.0121mins
 
                                                              
Doing region 28 XmasI (27/32) starting at 15-Nov-2025 17:59:54
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 0 files in scope
No dates in scope. Available data: 
                                   
 Seeking:                          
05-Nov-2025 06:40:13               
15-Nov-2025 06:40:13               
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
         99.35        110.65        -12.65         -4.35
99.6        0.2      110.4 -12.4        0.2       -4.6
nav 0
shipstride =
          6.00
                                                                  
Doing region 10 Kimberley (28/32) starting at 15-Nov-2025 17:59:58
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        117.95        127.65        -18.65        -11.15
118.2        0.2      127.4 -18.4        0.2      -11.4
nav 0
shipstride =
          5.00
region 10 Kimberley record 1/3 at 15-Nov-2025 18:00:00LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Kimberley_chl/2025110904.gif
region 10 Kimberley record 2/3 at 15-Nov-2025 18:00:10LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Kimberley_chl/2025110905.gif
region 10 Kimberley record 3/3 at 15-Nov-2025 18:00:24LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Kimberley_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Kimberley_chl//*.gif
mfli =
    'Kimberley_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Kimberley_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Kimberley_chl202511.fli 7
15-Nov-2025 18:00:43 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Kimberley_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Kimberley_chl
rsync took 0.0124mins
 
                                                               
Doing region 49 Rowley (29/32) starting at 15-Nov-2025 18:00:44
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 3 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        115.35        124.65        -21.65        -13.35
115.6        0.2      124.4 -21.4        0.2      -13.6
nav 0
shipstride =
          5.00
region 49 Rowley record 1/3 at 15-Nov-2025 18:00:46LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025110904.gif
region 49 Rowley record 2/3 at 15-Nov-2025 18:00:57LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025110905.gif
region 49 Rowley record 3/3 at 15-Nov-2025 18:01:11LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Rowley_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Rowley_chl//*.gif
mfli =
    'Rowley_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Rowley_chl202511.fli 150  2025110205.gif 2025110904.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Rowley_chl202511.fli 7
15-Nov-2025 18:01:34 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Rowley_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Rowley_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Rowley_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Rowley_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Rowley_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Rowley_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Rowley_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.019mins
 
                                                                
Doing region 50 Dongara (30/32) starting at 15-Nov-2025 18:01:36
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        110.55        116.25        -30.65        -26.35
110.8        0.2        116 -30.4        0.2      -26.6
nav 0
shipstride =
          3.00
region 50 Dongara record 1/2 at 15-Nov-2025 18:01:39LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Dongara_chl/2025110904.gif
region 50 Dongara record 2/2 at 15-Nov-2025 18:01:47LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Dongara_chl/2025110905.gif
ls /home/vamp1/pub_web/analysis/Dongara_chl//*.gif
mfli =
    'Dongara_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Dongara_chl202511.fli 150  2025110904.gif 2025110905.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Dongara_chl202511.fli 7
15-Nov-2025 18:02:02 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Dongara_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Dongara_chl
rsync took 0.012mins
 
                                                                
Doing region 51 Norfolk (31/32) starting at 15-Nov-2025 18:02:03
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 2 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        155.35        171.65        -33.65        -26.35
155.6        0.2      171.4 -33.4        0.2      -26.6
nav 0
shipstride =
          5.00
region 51 Norfolk record 1/2 at 15-Nov-2025 18:02:05LT, image time: 09-Nov-2025 05:20:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/jpss1/1d/2025/11/J20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110905
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/Norfolk_chl/2025110905.gif
region 51 Norfolk record 2/2 at 15-Nov-2025 18:02:12LT, image time: 11-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251111.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025111104
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251111.mat'
/home/vamp1/pub_web/analysis/Norfolk_chl/2025111104.gif
ls /home/vamp1/pub_web/analysis/Norfolk_chl//*.gif
mfli =
    'Norfolk_chl202511.fli'
/home/griffin/scripts/gifs2fliMC89.sh Norfolk_chl202511.fli 150  2025110205.gif 2025110905.gif 2025111104.gif 2025111105.gif
/home/griffin/scripts/fli2videoMC.sh Norfolk_chl202511.fli 7
15-Nov-2025 18:02:29 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Norfolk_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Norfolk_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Norfolk_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Norfolk_chl
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotCHL/TAGS/Norfolk_chl/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotCHL/TAGS/Norfolk_chl
11 building file list ... done
rsync: mkdir "SnapshotCHL/TAGS/Norfolk_chl" (in oceancurrent_website) failed: No such file or directory (2)
rsync error: error in file IO (code 11) at main.c(679) [Receiver=3.1.3]

rsync took 0.0232mins
 
                                                            
Doing region 48 GoC (32/32) starting at 15-Nov-2025 18:02:30
Looking for data in range:
ans =
    '05-Nov-2025 06:40:13'
ans =
    '15-Nov-2025 06:40:13'
chlor_a available 25-May-2022 04:30:00 - 11-Nov-2025 05:20:00(=97h old), 1 files in scope
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20251112, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
26-Oct-2025 12:00:00
27-Oct-2025 12:00:00
12-Nov-2025 12:00:00
haverun =
    'CMRNRT'
region =
        131.35        143.65        -18.65         -7.35
131.6        0.2      143.4 -18.4        0.2       -7.6
nav 0
shipstride =
          7.00
region 48 GoC record 1/1 at 15-Nov-2025 18:02:32LT, image time: 09-Nov-2025 04:30:00Z
getting https://mrs-data.csiro.au/thredds/dodsC/imos-srs/oc/snpp/1d/2025/11/V20251109.L2OC_VIIRS.aust.chl_oci.nc
plotted: chlor_a 2025110904
FS_tags_file =
    '/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2025/20251109.mat'
/home/vamp1/pub_web/analysis/GoC_chl/2025110904.gif
On the third stroke, it will be 15-Nov-2025 18:02:43
Plotting 32 regions took 0.375h. rsyncing took 0.491mins (0.0153mins/region avg). Thredds retries: 0
\rm /home/vamp1/intranet/cronlogs/DG/psst_chl/202509*.html
\rm /home/vamp1/intranet/cronlogs/DG/psst_chl/202509*.html
1 rm: cannot remove '/home/vamp1/intranet/cronlogs/DG/psst_chl/202509*.html': No such file or directory

finishing at 15-Nov-2025 18:02:43