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                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
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running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :64
[Warning: MATLAB has disabled some advanced graphics rendering features by
switching to software OpenGL. For more information, click here.] 
The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
psst_OC starting job nrtsst at 10-May-2026 05:30:12 on oc3-hba

usesats =
          2.00          3.00         18.00         19.00         20.00
Looking for data in range:
03-May-2026 19:30:13
09-May-2026 19:30:13
ans =
  4x18 char array
    'Bris3_   Brisbane2'
    'Bris-Syd Bris-Syd '
    'Coffs    Coffs    '
    'SNSW     SNSW     '
first read
--2026-05-10 05:30:13--  http://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2026-04-03T19%3A30%3A13+AND+TIME+%3C%3D+2026-05-09T19%3A30%3A13+AND+TEMP_b+%3D+true
Resolving geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)... 3.24.114.38, 13.237.130.230, 52.62.45.33
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|3.24.114.38|:80... connected.
HTTP request sent, awaiting response... 301 Moved Permanently
Location: https://geoserver-123.aodn.org.au:443/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2026-04-03T19%3A30%3A13+AND+TIME+%3C%3D+2026-05-09T19%3A30%3A13+AND+TEMP_b+%3D+true [following]
--2026-05-10 05:30:13--  https://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2026-04-03T19%3A30%3A13+AND+TIME+%3C%3D+2026-05-09T19%3A30%3A13+AND+TEMP_b+%3D+true
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|3.24.114.38|:443... connected.
HTTP request sent, awaiting response... 200 
Length: unspecified [text/csv]
Saving to: ‘/tmp/tpbcb476a1_c538_45e3_96f7_6e0f0c814dbf.csv’


          /tmp/tpbc     [<=>                 ]       0  --.-KB/s               
         /tmp/tpbcb     [ <=>                ]   1.63M  8.13MB/s               
        /tmp/tpbcb4     [  <=>               ]   3.05M  7.60MB/s               
       /tmp/tpbcb47     [   <=>              ]   4.43M  7.37MB/s               
      /tmp/tpbcb476     [    <=>             ]   5.86M  7.30MB/s               
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    /tmp/tpbcb476a1     [      <=>           ]   8.67M  7.20MB/s               
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tmp/tpbcb476a1_c538     [           <=>      ]  15.87M  7.18MB/s               
mp/tpbcb476a1_c538_     [            <=>     ]  17.34M  7.18MB/s               
p/tpbcb476a1_c538_4     [             <=>    ]  18.84M  7.20MB/s               
/tpbcb476a1_c538_45     [              <=>   ]  20.29M  7.20MB/s               
tpbcb476a1_c538_45e     [               <=>  ]  21.73M  7.20MB/s               
pbcb476a1_c538_45e3     [                <=> ]  23.12M  7.13MB/s               
bcb476a1_c538_45e3_     [                 <=>]  24.59M  7.13MB/s               
cb476a1_c538_45e3_9     [                <=> ]  26.08M  7.16MB/s               
b476a1_c538_45e3_96     [               <=>  ]  27.52M  7.16MB/s               
476a1_c538_45e3_96f     [              <=>   ]  28.96M  7.17MB/s               
/tmp/tpbcb476a1_c53     [             <=>    ]  29.05M  7.17MB/s    in 4.0s    

2026-05-10 05:30:23 (7.19 MB/s) - ‘/tmp/tpbcb476a1_c538_45e3_96f7_6e0f0c814dbf.csv’ saved [30456978]

FINISHED --2026-05-10 05:30:23--
Total wall clock time: 9.9s
Downloaded: 1 files, 29M in 4.0s (7.19 MB/s)
SOOP dates, sst, lat, lon, latf, lonf
1 03-Apr 20Z - 08-May 23Z, 20.7       30.6     -32.05     -12.34      112.9      130.8     -15.03     -12.34        125      130.8
2 04-Apr 00Z - 07-May 09Z, 18.28       22.3        -32     -31.82      115.5      115.7     -31.96     -31.84      115.6      115.7
3 03-Apr 20Z - 08-May 23Z, 27.6       29.5     -10.59       -9.5      141.9        144     -10.59      -9.95      141.9      143.1
4 03-Apr 20Z - 08-May 23Z, 15.8       31.2     -39.27      13.06      100.7      153.8     -36.18      -5.55      105.1      121.3
5 03-Apr 19Z - 07-May 23Z, 25.26      28.27     -20.27     -18.26      146.4      150.1     -19.15     -18.42      146.9      147.6
6 03-Apr 19Z - 07-May 23Z, 26.95      37.13     -21.85     -15.36      113.9      122.6     -21.85     -16.35      113.9      122.5
7 03-Apr 20Z - 08-May 23Z, 15.8       19.3     -41.18     -38.08      144.4      146.4     -41.18     -38.09      144.4      146.4
 
reading ACORN data at 10-May-2026 05:30:25
                                          
             
ROT _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheROT_non-QC2026.mat                           
had 2258 records from 01-Jan-2026 00:00:00 to 05-May-2026 00:00:00 = 76% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/ROT/2026/catalog.xml'
tcatal =
         15.89
Found 2258 in catalog, 2258 for _ROT_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
             
SAG _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheSAG_non-QC2026.mat                           
had 1052 records from 01-Jan-2026 00:30:00 to 23-Mar-2026 01:30:00 = 54% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/SAG/2026/catalog.xml'
tcatal =
          7.97
Found 1052 in catalog, 1052 for _SAG_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
              
NEWC _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat                          
had 2238 records from 01-Jan-2026 00:00:00 to 08-May-2026 00:00:00 = 73% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/NEWC/2026/catalog.xml'
tcatal =
         14.97
Found 2243 in catalog, 2243 for _NEWC_. 5 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260508T020000Z_NEWC_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260508T110000Z_NEWC_FV00_1-hour-avg.nc
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:31:16 IMOS_ACORN_V_20260508T020000Z_NEWC_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:31:23 IMOS_ACORN_V_20260508T040000Z_NEWC_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:31:27 IMOS_ACORN_V_20260508T060000Z_NEWC_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:31:32 IMOS_ACORN_V_20260508T080000Z_NEWC_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:31:36 IMOS_ACORN_V_20260508T110000Z_NEWC_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat
Took 1min =0h to read data for 08-May-2026 02:00:00 - 08-May-2026 11:00:00
                                                                                                
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat                              
now has 2243 records from 01-Jan-2026 00:00:00 to 08-May-2026 11:00:00 = 73% complete for period
              
TURQ _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat                          
had 2590 records from 01-Jan-2026 00:00:00 to 08-May-2026 01:00:00 = 85% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/TURQ/2026/catalog.xml'
tcatal =
         16.28
Found 2600 in catalog, 2600 for _TURQ_. 10 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260508T020000Z_TURQ_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260508T110000Z_TURQ_FV00_1-hour-avg.nc
Reading 10 then estimating time to read them all:
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:04 IMOS_ACORN_V_20260508T020000Z_TURQ_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:13 IMOS_ACORN_V_20260508T030000Z_TURQ_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:17 IMOS_ACORN_V_20260508T040000Z_TURQ_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:21 IMOS_ACORN_V_20260508T050000Z_TURQ_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:26 IMOS_ACORN_V_20260508T060000Z_TURQ_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:30 IMOS_ACORN_V_20260508T070000Z_TURQ_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:34 IMOS_ACORN_V_20260508T080000Z_TURQ_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:39 IMOS_ACORN_V_20260508T090000Z_TURQ_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:43 IMOS_ACORN_V_20260508T100000Z_TURQ_FV00_1-hour-avg.nc had 1 records
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
10-May-2026 05:32:47 IMOS_ACORN_V_20260508T110000Z_TURQ_FV00_1-hour-avg.nc had 1 records
reading 10 files will take about 1min =0h
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat
Took 1min =0h to read data for 08-May-2026 02:00:00 - 08-May-2026 11:00:00
                                                                                                
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat                              
now has 2600 records from 01-Jan-2026 00:00:00 to 08-May-2026 11:00:00 = 85% complete for period
              
CORL _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCORL_non-QC2026.mat                          
had 1259 records from 24-Feb-2026 23:00:00 to 08-May-2026 01:00:00 = 73% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/CORL/2026/catalog.xml'
tcatal =
          8.53
Found 1259 in catalog, 1259 for _CORL_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
             
NWA _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat                           
had 1545 records from 01-Jan-2026 00:30:00 to 04-May-2026 11:30:00 = 52% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/NWA/2026/catalog.xml'
tcatal =
         12.42
Found 1545 in catalog, 1545 for _NWA_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
             
COF _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCOF_non-QC2026.mat                           
had 2723 records from 01-Jan-2026 00:30:00 to 05-May-2026 00:30:00 = 91% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/COF/2026/catalog.xml'
tcatal =
         14.34
Found 2723 in catalog, 2723 for _COF_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
Finished reading ACORN data at 10-May-2026 05:33:33
                                                   
reading 7 drifter files
interpolating 0 drifters
getting nrt Argo
Found 180 profiles
                                                                                       
loaded Argo data for 180 profiles, spanning 28-Apr-2026 19:34:00 - 09-May-2026 06:12:37
                                                                                       
Reading 72 MNF files and binning at 15-min intervals
Found 288 ship data points in lat, lon range-44  -43  145  147 from 03-May-2026 20:08:30 to 06-May-2026 16:53:30
count, min, max, median SST: 62  14  15  15
glf =
    'nrt_all_v8'
gltypes =
  1x2 cell array
    {'seaglider'}    {'slocum_glider'}
update from thredds?: 1
loaded data for 74 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/nrt_all_v8. Last10:
MissionBeach20260507 7 09-May-2026 18:36:22 
Sydney20260506       8 09-May-2026 05:35:22 
BassStrait20260424   44 09-May-2026 18:36:08 
Portland20260331     83 22-Apr-2026 10:35:58 
TwoRocks20260327     47 13-Apr-2026 10:34:29 
BassStrait20260316   44 31-Mar-2026 10:35:33 
Portland20260310     75 30-Mar-2026 10:36:15 
TwoRocks20260116     0 31-Dec-1999 
PortLincoln20260210  22 04-Mar-2026 10:35:29 
PortLincoln20260123  0 31-Dec-1999 
MissionBeach20260220 76 22-Mar-2026 18:36:50 
  folder       nfol datespan   nnow reading
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/seaglider/catalog.xml'
list_thredds_folders FAILED
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/slocum_glider/catalog.xml'
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/BassStrait20260424/IMOS_ANFOG_BCEOSTUV_20260424T020658Z_SL1227_FV00_timeseries_END-20260509T175659Z.nc'}
                                                                                
10-May-2026 05:34:59 Found 1 .nc files in IMOS/ANFOG/REALTIME/BassStrait20260424
BassStrait20260424   had data til 09-May-2026 03:59:27
not checking for gap-filling files
found 1 uncached .nc files in timerange for BassStrait20260424
BassStrait20260424 1: 24-Apr-2026 - 09-May-2026 1: 24-Apr-2026 02:06:58 - 09-May-2026 17:56:59
had already: 44:  24-Apr-2026 02:15:58 - 09-May-2026 03:59:27
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/BassStrait20260424/IMOS_ANFOG_BCEOSTUV_20260424T020658Z_SL1227_FV00_timeseries_END-20260509T175659Z.nc
max(julall)= 09-May-2026 17:56:59
length(julall)= 72871
range(find(cndci>2))= 2  72823
range(find(julall>maxjulj))= 70323  72871
2026-05-09T18:22:16Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
2500 2497 110     
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 225.143        227.43       229.554
expected 2500 records with 0>depth<3000 but found only 2199 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/BassStrait20260424/IMOS_ANFOG_BCEOSTUV_20260424T020658Z_SL1227_FV00_timeseries_END-20260509T175659Z.nc
slocum_glider BassStrait20260424   has 45 dives in area 146 147 -41 -39.4 during 24-Apr-2026 02:15:58 to 09-May-2026 15:59:13
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260507/IMOS_ANFOG_BCEOSTUV_20260507T000356Z_SL209_FV00_timeseries_END-20260509T185343Z.nc'}
                                                                                  
10-May-2026 05:35:21 Found 1 .nc files in IMOS/ANFOG/REALTIME/MissionBeach20260507
MissionBeach20260507 had data til 09-May-2026 07:05:18
not checking for gap-filling files
found 1 uncached .nc files in timerange for MissionBeach20260507
MissionBeach20260507 1: 07-May-2026 - 09-May-2026 1: 07-May-2026 00:03:56 - 09-May-2026 18:53:43
had already: 7:  07-May-2026 00:13:55 - 09-May-2026 07:05:18
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260507/IMOS_ANFOG_BCEOSTUV_20260507T000356Z_SL209_FV00_timeseries_END-20260509T185343Z.nc
max(julall)= 09-May-2026 18:53:43
length(julall)= 4568
range(find(cndci>2))= 2  4568
range(find(julall>maxjulj))= 3821  4568
2026-05-09T19:19:56Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
748 735 79        
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 203.11        206.15        206.83
expected 748 records with 0>depth<3000 but found only 684 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260507/IMOS_ANFOG_BCEOSTUV_20260507T000356Z_SL209_FV00_timeseries_END-20260509T185343Z.nc
slocum_glider MissionBeach20260507 has 8 dives in area 146 147 -17.8 -17.6 during 07-May-2026 00:13:55 to 09-May-2026 18:11:16
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Portland20250522/IMOS_ANFOG_BCEOSTUV_20250522T014642Z_SL287_FV00_timeseries_END-20250522T025759Z.nc'}
                                                                              
10-May-2026 05:35:34 Found 1 .nc files in IMOS/ANFOG/REALTIME/Portland20250522
Portland20250522     had data til 22-May-2025 02:57:59
not checking for gap-filling files
found 0 uncached .nc files in timerange for Portland20250522
Portland20250522 1: 22-May-2025 - 22-May-2025 0:  - 
had already: 1:  22-May-2025 01:59:59 - 22-May-2025 02:57:59
slocum_glider Portland20250522     had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Portland20260331/IMOS_ANFOG_BCEOSTUV_20260331T033559Z_SL994_FV00_timeseries_END-20260422T021042Z.nc'}
                                                                              
10-May-2026 05:35:34 Found 1 .nc files in IMOS/ANFOG/REALTIME/Portland20260331
Portland20260331     had data til 21-Apr-2026 23:18:46
not checking for gap-filling files
found 0 uncached .nc files in timerange for Portland20260331
Portland20260331 1: 31-Mar-2026 - 22-Apr-2026 0:  - 
had already: 83:  31-Mar-2026 03:43:39 - 21-Apr-2026 23:18:46
slocum_glider Portland20260331     had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Sydney20260506/IMOS_ANFOG_BCEOSTUV_20260506T014059Z_SL287_FV00_timeseries_END-20260509T180659Z.nc'}
                                                                            
10-May-2026 05:35:35 Found 1 .nc files in IMOS/ANFOG/REALTIME/Sydney20260506
Sydney20260506       had data til 08-May-2026 14:40:25
not checking for gap-filling files
found 1 uncached .nc files in timerange for Sydney20260506
Sydney20260506 1: 06-May-2026 - 09-May-2026 1: 06-May-2026 01:40:59 - 09-May-2026 18:06:59
had already: 8:  06-May-2026 01:52:28 - 08-May-2026 14:40:25
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/Sydney20260506/IMOS_ANFOG_BCEOSTUV_20260506T014059Z_SL287_FV00_timeseries_END-20260509T180659Z.nc
max(julall)= 09-May-2026 18:06:59
length(julall)= 19563
range(find(cndci>2))= 2  19563
range(find(julall>maxjulj))= 13174  19563
2026-05-09T18:40:45Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
6390 6386 31      
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 355.85        473.72        585.39
expected 6390 records with 0>depth<3000 but found only 6056 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/Sydney20260506/IMOS_ANFOG_BCEOSTUV_20260506T014059Z_SL287_FV00_timeseries_END-20260509T180659Z.nc
slocum_glider Sydney20260506       has 9 dives in area 151 152 -34.1 -33.9 during 06-May-2026 01:52:28 to 09-May-2026 16:32:16
........
                                                                       
MISSING/RENAMED/REPROCESSED MISSIONS: (in the cache but not at thredds)
BassStrait20210716  
MissionBeach20220921
Portland20220826    
Portland20220922    
TwoRocks20210719    
TwoRocks20210812    
TwoRocks20220916    
Forster20221003     
Cooktown20221117    
Yamba20221123       
TwoRocks20221125    
Forster20230217     
MissionBeach20230203
MurrayPlume20230225 
Sydney20230301      
TasWestCoast20230405
ScottReef120230424  
ScottReef220230424  
ScottReef320230424  
BassStrait20230518  
Cairns20230608      
TwoRocks20230613    
Cairns20230628      
Forster220230714    
Forster20230718     
TwoRocks20230817    
TwoRocks20230830    
MissionBeach20231005
Forster20231010     
BassStrait20231109  
TasEastCoast20231207
BassStrait20240520  
Forster20240220     
Forster20240517     
Forster20240621     
TwoRocks20240308    
MissionBeach20240713
TwoRocks20240808    
TasEastCoast20240829
MissionBeach20240920
Forster20241030     
TasEastCoast20241031
Yamba20241031       
Onslow20241119      
Forster20241128     
Yamba20241113       
MissionBeach20250110
TwoRocks20250123    
Ningaloo20250129    
Onslow20250129      
TwoRocks20250219    
Forster20250225     
Onslow20250225      
Portland20250312    
Esperance20250327   
Ningaloo20250402    
BassStrait20250501  
Forster20250507     
TwoRocks20250515    
PortLincoln20250529 
Forster20260122     
MissionBeach20260115
MissionBeach20260220
PortLincoln20260123 
PortLincoln20260210 
TwoRocks20260116    
Portland20260310    
BassStrait20260316  
TwoRocks20260327    
        
summary:
Finished reading nrt_all_v8 ANFOG (glider) data at 10-May-2026 05:35:58
                                                                       
                                                             
Doing region 46 Bris3_ (1/4) starting at 10-May-2026 05:35:58
deleting 1 files from /home/vamp1/pub_web/analysis/Bris3_/2026050903.gif to 2026050903.gif
rm /home/vamp1/pub_web/analysis/Bris3_/2026050903.gif
Looking for data in range:
ans =
    '03-May-2026 19:30:13'
ans =
    '09-May-2026 19:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/
Browser URL:  https://mrs-data.csiro.au/thredds/catalog/imos-srs/sst/ghrsst/L3U/catalog.html
ghrsstFS =
    'https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/'
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8 with pcgood for 10-Mar-2019 00:08:59 - 09-May-2026 04:00:00
Found 296522 /RT files in the whole indexcache. Fixed 0 filenames with no .gz
changed 0 file extensions from .nc.gz to .nc4
/usr/local/bin/xwget.sh -O 202605100536index.nc -N -t 4 https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3U/index.nc
maxage =
      12546.55
202605100536index.nc has 977602 records, the first and last have date, satnum:
02-Jan-1992 06:21:59 (NOAA11)
09-May-2026 13:30:00 (NOAA20)
The earliest and latest SST data are 34yr and 6 h old, for
02-Jan-1992 06:21:59 (NOAA11)
09-May-2026 13:30:00 (NOAA20)
sat numbers are: 2   3   9  11  12  14  15  16  17  18  19  20
in last 200 files: 20
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [2  1])
Index.nc has 768 files for the period 
indexcachefile has 513 files for the period 
reading 45 files 977548  977602 will take about 5min =0h at 7s each
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [2  1])
20260509031000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
nlats =
       2500.00
xgetnc doing permute(values, [3  2  1])
09-May-2026 03:10:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509032000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 03:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0   0   0   0   0  16  13   9   0
20260509045000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 04:50:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509050000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:00:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0   0   3  18   5  18   5   0   0
20260509051000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:10:00 t0,1,2,3= 1  2  2  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
10-May-2026 05:36:28
saved /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8
20260509051000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:10:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509051000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:10:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 29  31   0   0   0   0   0   0   0
20260509052000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0   0  61  26   4  10   0   0   0
20260509052000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0   0  61  26   4  10   0   0   0
20260509052000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509053000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:30:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 25  52   0   0   0   0   0   0   0
20260509053000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:30:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 25  52   0   0   0   0   0   0   0
20260509054000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:40:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509054000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 05:40:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509063000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 06:30:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509064000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 06:40:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0   0  28  23   0   0   0   0   0
20260509065000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 06:50:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509065000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 06:50:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509065000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 06:50:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  49  40   0   0   0   0   0   0
20260509070000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 07:00:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0   0  59  14   0   0   0   0   0
20260509070000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 07:00:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0   0  59  14   0   0   0   0   0
20260509070000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 07:00:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509071000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 07:10:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  8  4  0  0  0  0  0  0
20260509071000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 07:10:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  8  4  0  0  0  0  0  0
20260509072000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 07:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
10-May-2026 05:37:40
saved /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8
20260509072000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 07:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509081000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 08:10:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509082000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 08:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509083000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 08:30:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509084000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 08:40:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509084000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 08:40:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509084000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 08:40:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509085000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 08:50:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509085000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 08:50:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509090000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 09:00:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509100000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 10:00:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509101000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 10:10:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509102000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 10:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509113000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 11:30:00 t0,1,2,3= 1  2  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509114000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 11:40:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509115000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 11:50:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509130000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 13:00:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509131000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 13:10:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509132000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 13:20:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
20260509133000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc    
xgetnc doing permute(values, [3  2  1])
09-May-2026 13:30:00 t0,1,2,3= 1  1  1  0s  heap: 293Mb, free: 95Mb %good= 0  0  0  0  0  0  0  0  0
10-May-2026 05:38:56
saved /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8
/home/vamp1/pub_web/analysis/L3U_pcg/2026051005.tif
\rm 202605100536index.nc
L3U available to 09-May-2026 13:30:00(=6h old)
23 cached images are in the time-window, as are 558 files at thredds. 0 of those have sufficient %good.
seeking earlier data
reading
    'in2023_v06/proc/wh75/contour/wh75'
 
/home/vamp1/sco243/investigator_adcp/in2023_v06/proc/wh75/contour/wh75.nc
Cruise area: 151       158     -38.9     -31.9
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260506, -60...10, 57...185
get_USNRT is reading GSLA
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
get_USNRT finished reading GSLA
get_USNRT is reading GSL
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
get_USNRT finished reading GSL
24-Apr-2026 12:00:00
25-Apr-2026 12:00:00
06-May-2026 12:00:00
haverun =
    'CMRNRT'
xgetnc doing permute(values, [2  1])
region =
        151.75        156.65        -30.45        -25.75
152        0.2      156.4 -30.2        0.2        -26
nav 0
CLNAME - "CARS_latest" version being used by default.
[  This warning once per session only  ]
shipstride =
          3.00
region 46 Bris3_ record 1/18 at 10-May-2026 05:39:08LT, image time: 03-May-2026 22:52:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605032252.mat  8 % good
plotted: NOAA _M 2026050322 8% new good 73% total good
region 46 Bris3_ record 2/18 at 10-May-2026 05:39:10LT, image time: 04-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605040340.mat  28 % good
plotted: VIIRS_N20 2026050403 28% new good 70% total good
region 46 Bris3_ record 3/18 at 10-May-2026 05:39:11LT, image time: 04-May-2026 11:16:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605041116.mat  31 % good
plotted: NOAA _M 2026050411 31% new good 75% total good
region 46 Bris3_ record 4/18 at 10-May-2026 05:39:12LT, image time: 06-May-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605060240.mat  20 % good
plotted: VIIRS_NPP 2026050602 20% new good 74% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050602.gif
region 46 Bris3_ record 5/18 at 10-May-2026 05:39:14LT, image time: 06-May-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605060300.mat  26 % good
plotted: VIIRS_N20 2026050603 26% new good 74% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050603.gif
region 46 Bris3_ record 6/18 at 10-May-2026 05:39:17LT, image time: 06-May-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605060420.mat  16 % good
plotted: VIIRS_NPP 2026050604 16% new good 74% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050604.gif
region 46 Bris3_ record 7/18 at 10-May-2026 05:39:19LT, image time: 06-May-2026 13:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605061350.mat  6 % good
plotted: VIIRS_NPP 2026050613 6% new good 74% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050613.gif
region 46 Bris3_ record 8/18 at 10-May-2026 05:39:23LT, image time: 06-May-2026 14:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605061410.mat  19 % good
plotted: VIIRS_N20 2026050614 19% new good 74% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050614.gif
region 46 Bris3_ record 9/18 at 10-May-2026 05:39:26LT, image time: 06-May-2026 15:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605061540.mat  9 % good
plotted: VIIRS_NPP 2026050615 9% new good 74% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050615.gif
region 46 Bris3_ record 10/18 at 10-May-2026 05:39:29LT, image time: 07-May-2026 13:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605071350.mat  1 % good
plotted: VIIRS_N20 2026050713 1% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050713.gif
region 46 Bris3_ record 11/18 at 10-May-2026 05:39:31LT, image time: 07-May-2026 14:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605071400.mat  31 % good
plotted: VIIRS_N20 2026050714 31% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050714.gif
region 46 Bris3_ record 12/18 at 10-May-2026 05:39:34LT, image time: 07-May-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605071520.mat  42 % good
plotted: VIIRS_NPP 2026050715 42% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050715.gif
region 46 Bris3_ record 13/18 at 10-May-2026 05:39:37LT, image time: 07-May-2026 15:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605071540.mat  40 % good
plotted: VIIRS_N20 2026050715 40% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050715.gif
region 46 Bris3_ record 14/18 at 10-May-2026 05:39:39LT, image time: 08-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605080340.mat  64 % good
plotted: VIIRS_NPP 2026050803 64% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050803.gif
region 46 Bris3_ record 15/18 at 10-May-2026 05:39:41LT, image time: 08-May-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605080400.mat  67 % good
plotted: VIIRS_N20 2026050804 67% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050804.gif
region 46 Bris3_ record 16/18 at 10-May-2026 05:39:44LT, image time: 08-May-2026 15:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605081500.mat  55 % good
plotted: VIIRS_NPP 2026050815 55% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050815.gif
region 46 Bris3_ record 17/18 at 10-May-2026 05:39:46LT, image time: 08-May-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605081520.mat  48 % good
plotted: VIIRS_N20 2026050815 48% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050815.gif
region 46 Bris3_ record 18/18 at 10-May-2026 05:39:49LT, image time: 09-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202605090340.mat  27 % good
plotted: VIIRS_N20 2026050903 27% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026050903.gif
ls /home/vamp1/pub_web/analysis/Bris3_//*.gif
mfli =
    'Bris3_202605.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris3_202605.fli 150  2026050110.gif 2026050121.gif 2026050213.gif 2026050215.gif 2026050303.gif 2026050311.gif 2026050314.gif 2026050315.gif 2026050322.gif 2026050403.gif 2026050411.gif 2026050602.gif 2026050603.gif 2026050604.gif 2026050613.gif 2026050614.gif 2026050615.gif 2026050713.gif 2026050714.gif 2026050715.gif 2026050803.gif 2026050804.gif 2026050815.gif 2026050903.gif
/home/griffin/scripts/fli2videoMC.sh Bris3_202605.fli 7
10-May-2026 05:39:56 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris3_/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris3_
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/Bris3_/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/Bris3_
rsync took 0.0622mins
 
                                                               
Doing region 39 Bris-Syd (2/4) starting at 10-May-2026 05:40:00
deleting 1 files from /home/vamp1/pub_web/analysis/Bris-Syd/2026050903.gif to 2026050903.gif
rm /home/vamp1/pub_web/analysis/Bris-Syd/2026050903.gif
Looking for data in range:
ans =
    '03-May-2026 19:30:13'
ans =
    '09-May-2026 19:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/
Browser URL:  https://mrs-data.csiro.au/thredds/catalog/imos-srs/sst/ghrsst/L3U/catalog.html
ghrsstFS =
    'https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/'
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8 with pcgood for 10-Mar-2019 00:08:59 - 09-May-2026 13:30:00
Found 296557 /RT files in the whole indexcache. Fixed 0 filenames with no .gz
changed 0 file extensions from .nc.gz to .nc4
/usr/local/bin/xwget.sh -O 202605100540index.nc -N -t 4 https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3U/index.nc
maxage =
      12546.55
202605100540index.nc has 977602 records, the first and last have date, satnum:
02-Jan-1992 06:21:59 (NOAA11)
09-May-2026 13:30:00 (NOAA20)
The earliest and latest SST data are 34yr and 6 h old, for
02-Jan-1992 06:21:59 (NOAA11)
09-May-2026 13:30:00 (NOAA20)
sat numbers are: 2   3   9  11  12  14  15  16  17  18  19  20
in last 200 files: 20
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [2  1])
Index.nc has 768 files for the period 
indexcachefile has 558 files for the period 
reading 0 files  will take about 0min =0h at 7s each
not updating /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8. (updateSST=1 length(fi)=0)
\rm 202605100540index.nc
L3U available to 09-May-2026 13:30:00(=6h old)
24 cached images are in the time-window, as are 558 files at thredds. 0 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260506, -60...10, 57...185
get_USNRT is reading GSLA
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
get_USNRT finished reading GSLA
get_USNRT is reading GSL
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
get_USNRT finished reading GSL
24-Apr-2026 12:00:00
25-Apr-2026 12:00:00
06-May-2026 12:00:00
haverun =
    'CMRNRT'
xgetnc doing permute(values, [2  1])
region =
        149.95        158.25        -35.05        -26.35
150.2        0.2        158 -34.8        0.2      -26.6
nav 0
shipstride =
          4.00
region 39 Bris-Syd record 1/20 at 10-May-2026 05:40:17LT, image time: 04-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605040340.mat  12 % good
plotted: VIIRS_N20 2026050403 12% new good 67% total good
region 39 Bris-Syd record 2/20 at 10-May-2026 05:40:19LT, image time: 04-May-2026 11:16:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605041116.mat  9 % good
plotted: NOAA _M 2026050411 9% new good 68% total good
region 39 Bris-Syd record 3/20 at 10-May-2026 05:40:22LT, image time: 06-May-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605060240.mat  11 % good
plotted: VIIRS_NPP 2026050602 11% new good 67% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050602.gif
region 39 Bris-Syd record 4/20 at 10-May-2026 05:40:28LT, image time: 06-May-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605060300.mat  16 % good
plotted: VIIRS_N20 2026050603 16% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050603.gif
region 39 Bris-Syd record 5/20 at 10-May-2026 05:40:34LT, image time: 06-May-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605060420.mat  12 % good
plotted: VIIRS_NPP 2026050604 12% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050604.gif
region 39 Bris-Syd record 6/20 at 10-May-2026 05:40:41LT, image time: 06-May-2026 14:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605061400.mat  22 % good
plotted: VIIRS_NPP 2026050614 22% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050614.gif
region 39 Bris-Syd record 7/20 at 10-May-2026 05:40:48LT, image time: 06-May-2026 14:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605061410.mat  21 % good
plotted: VIIRS_N20 2026050614 21% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050614.gif
region 39 Bris-Syd record 8/20 at 10-May-2026 05:40:55LT, image time: 06-May-2026 14:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605061420.mat  11 % good
plotted: VIIRS_N20 2026050614 11% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050614.gif
region 39 Bris-Syd record 9/20 at 10-May-2026 05:41:02LT, image time: 06-May-2026 15:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605061540.mat  17 % good
plotted: VIIRS_NPP 2026050615 17% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050615.gif
region 39 Bris-Syd record 10/20 at 10-May-2026 05:41:10LT, image time: 07-May-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605070240.mat  10 % good
plotted: VIIRS_N20 2026050702 10% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050702.gif
region 39 Bris-Syd record 11/20 at 10-May-2026 05:41:17LT, image time: 07-May-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605070420.mat  6 % good
plotted: VIIRS_N20 2026050704 6% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050704.gif
region 39 Bris-Syd record 12/20 at 10-May-2026 05:41:23LT, image time: 07-May-2026 14:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605071400.mat  21 % good
plotted: VIIRS_N20 2026050714 21% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050714.gif
region 39 Bris-Syd record 13/20 at 10-May-2026 05:41:30LT, image time: 07-May-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605071520.mat  25 % good
plotted: VIIRS_NPP 2026050715 25% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050715.gif
region 39 Bris-Syd record 14/20 at 10-May-2026 05:41:36LT, image time: 07-May-2026 15:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605071540.mat  22 % good
plotted: VIIRS_N20 2026050715 22% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050715.gif
region 39 Bris-Syd record 15/20 at 10-May-2026 05:41:42LT, image time: 08-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605080340.mat  29 % good
plotted: VIIRS_NPP 2026050803 29% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050803.gif
region 39 Bris-Syd record 16/20 at 10-May-2026 05:41:48LT, image time: 08-May-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605080400.mat  30 % good
plotted: VIIRS_N20 2026050804 30% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050804.gif
region 39 Bris-Syd record 17/20 at 10-May-2026 05:41:54LT, image time: 08-May-2026 13:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605081340.mat  8 % good
plotted: VIIRS_N20 2026050813 8% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050813.gif
region 39 Bris-Syd record 18/20 at 10-May-2026 05:41:59LT, image time: 08-May-2026 15:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605081500.mat  26 % good
plotted: VIIRS_NPP 2026050815 26% new good 68% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050815.gif
region 39 Bris-Syd record 19/20 at 10-May-2026 05:42:04LT, image time: 08-May-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605081520.mat  23 % good
plotted: VIIRS_N20 2026050815 23% new good 67% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050815.gif
region 39 Bris-Syd record 20/20 at 10-May-2026 05:42:08LT, image time: 09-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202605090340.mat  17 % good
plotted: VIIRS_N20 2026050903 17% new good 67% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026050903.gif
ls /home/vamp1/pub_web/analysis/Bris-Syd//*.gif
mfli =
    'Bris-Syd202605.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris-Syd202605.fli 150  2026050110.gif 2026050114.gif 2026050121.gif 2026050202.gif 2026050204.gif 2026050213.gif 2026050215.gif 2026050303.gif 2026050314.gif 2026050315.gif 2026050403.gif 2026050411.gif 2026050602.gif 2026050603.gif 2026050604.gif 2026050614.gif 2026050615.gif 2026050702.gif 2026050704.gif 2026050714.gif 2026050715.gif 2026050803.gif 2026050804.gif 2026050813.gif 2026050815.gif 2026050903.gif
/home/griffin/scripts/fli2videoMC.sh Bris-Syd202605.fli 7
10-May-2026 05:42:18 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris-Syd/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris-Syd
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/Bris-Syd/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/Bris-Syd
rsync took 0.487mins
 
                                                            
Doing region 25 Coffs (3/4) starting at 10-May-2026 05:42:47
deleting 1 files from /home/vamp1/pub_web/analysis/Coffs/2026050903.gif to 2026050903.gif
rm /home/vamp1/pub_web/analysis/Coffs/2026050903.gif
Looking for data in range:
ans =
    '03-May-2026 19:30:13'
ans =
    '09-May-2026 19:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/
L3U available to 09-May-2026 13:30:00(=6h old)
18 cached images are in the time-window, as are 558 files at thredds. 0 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260506, -60...10, 57...185
get_USNRT is reading GSLA
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
get_USNRT finished reading GSLA
get_USNRT is reading GSL
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
get_USNRT finished reading GSL
24-Apr-2026 12:00:00
25-Apr-2026 12:00:00
06-May-2026 12:00:00
haverun =
    'CMRNRT'
xgetnc doing permute(values, [2  1])
region =
        152.15        155.45        -32.05        -28.95
152.4        0.2      155.2 -31.8        0.2      -29.2
nav 0
shipstride =
          2.00
region 25 Coffs record 1/16 at 10-May-2026 05:42:55LT, image time: 04-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605040340.mat  38 % good
plotted: VIIRS_N20 2026050403 38% new good 97% total good
region 25 Coffs record 2/16 at 10-May-2026 05:42:56LT, image time: 04-May-2026 11:16:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605041116.mat  9 % good
plotted: NOAA _M 2026050411 9% new good 98% total good
region 25 Coffs record 3/16 at 10-May-2026 05:42:57LT, image time: 06-May-2026 14:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605061400.mat  8 % good
plotted: VIIRS_NPP 2026050614 8% new good 96% total good
/home/vamp1/pub_web/analysis/Coffs/2026050614.gif
region 25 Coffs record 4/16 at 10-May-2026 05:42:58LT, image time: 06-May-2026 14:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605061410.mat  15 % good
plotted: VIIRS_N20 2026050614 15% new good 96% total good
/home/vamp1/pub_web/analysis/Coffs/2026050614.gif
region 25 Coffs record 5/16 at 10-May-2026 05:43:00LT, image time: 06-May-2026 15:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605061540.mat  9 % good
plotted: VIIRS_NPP 2026050615 9% new good 97% total good
/home/vamp1/pub_web/analysis/Coffs/2026050615.gif
region 25 Coffs record 6/16 at 10-May-2026 05:43:02LT, image time: 07-May-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605070240.mat  13 % good
plotted: VIIRS_N20 2026050702 13% new good 97% total good
/home/vamp1/pub_web/analysis/Coffs/2026050702.gif
region 25 Coffs record 7/16 at 10-May-2026 05:43:04LT, image time: 07-May-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605070400.mat  8 % good
plotted: VIIRS_NPP 2026050704 8% new good 97% total good
/home/vamp1/pub_web/analysis/Coffs/2026050704.gif
region 25 Coffs record 8/16 at 10-May-2026 05:43:05LT, image time: 07-May-2026 14:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605071400.mat  90 % good
plotted: VIIRS_N20 2026050714 90% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050714.gif
region 25 Coffs record 9/16 at 10-May-2026 05:43:07LT, image time: 07-May-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605071520.mat  93 % good
plotted: VIIRS_NPP 2026050715 93% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050715.gif
region 25 Coffs record 10/16 at 10-May-2026 05:43:09LT, image time: 07-May-2026 15:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605071540.mat  95 % good
plotted: VIIRS_N20 2026050715 95% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050715.gif
region 25 Coffs record 11/16 at 10-May-2026 05:43:11LT, image time: 08-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605080340.mat  98 % good
plotted: VIIRS_NPP 2026050803 98% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050803.gif
region 25 Coffs record 12/16 at 10-May-2026 05:43:12LT, image time: 08-May-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605080400.mat  96 % good
plotted: VIIRS_N20 2026050804 96% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050804.gif
region 25 Coffs record 13/16 at 10-May-2026 05:43:14LT, image time: 08-May-2026 13:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605081340.mat  8 % good
plotted: VIIRS_N20 2026050813 8% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050813.gif
region 25 Coffs record 14/16 at 10-May-2026 05:43:16LT, image time: 08-May-2026 15:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605081500.mat  60 % good
plotted: VIIRS_NPP 2026050815 60% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050815.gif
region 25 Coffs record 15/16 at 10-May-2026 05:43:18LT, image time: 08-May-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605081520.mat  54 % good
plotted: VIIRS_N20 2026050815 54% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050815.gif
region 25 Coffs record 16/16 at 10-May-2026 05:43:19LT, image time: 09-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202605090340.mat  17 % good
plotted: VIIRS_N20 2026050903 17% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026050903.gif
ls /home/vamp1/pub_web/analysis/Coffs//*.gif
mfli =
    'Coffs202605.fli'
/home/griffin/scripts/gifs2fliMC89.sh Coffs202605.fli 150  2026050110.gif 2026050114.gif 2026050121.gif 2026050204.gif 2026050213.gif 2026050314.gif 2026050315.gif 2026050403.gif 2026050411.gif 2026050614.gif 2026050615.gif 2026050702.gif 2026050704.gif 2026050714.gif 2026050715.gif 2026050803.gif 2026050804.gif 2026050813.gif 2026050815.gif 2026050903.gif
/home/griffin/scripts/fli2videoMC.sh Coffs202605.fli 7
10-May-2026 05:43:24 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Coffs/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Coffs
rsync took 0.0156mins
 
                                                          
Doing region 2 SNSW (4/4) starting at 10-May-2026 05:43:25
deleting 1 files from /home/vamp1/pub_web/analysis/SNSW/2026050903.gif to 2026050903.gif
rm /home/vamp1/pub_web/analysis/SNSW/2026050903.gif
Looking for data in range:
ans =
    '03-May-2026 19:30:13'
ans =
    '09-May-2026 19:30:13'
looking for AATAMS tag data:
wanted 01-Jan-2026 - 01-Jan-2027, scanning 2026
no tags found
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/
L3U available to 09-May-2026 13:30:00(=6h old)
22 cached images are in the time-window, as are 558 files at thredds. 0 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260506, -60...10, 57...185
get_USNRT is reading GSLA
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
get_USNRT finished reading GSLA
get_USNRT is reading GSL
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
get_USNRT finished reading GSL
24-Apr-2026 12:00:00
25-Apr-2026 12:00:00
06-May-2026 12:00:00
haverun =
    'CMRNRT'
xgetnc doing permute(values, [2  1])
region =
        148.75        156.25        -38.05        -30.95
149        0.2        156 -37.8        0.2      -31.2
nav 0
shipstride =
          4.00
region 2 SNSW record 1/19 at 10-May-2026 05:43:38LT, image time: 05-May-2026 14:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605051420.mat  15 % good
plotted: VIIRS_NPP 2026050514 15% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050514.gif
region 2 SNSW record 2/19 at 10-May-2026 05:43:46LT, image time: 05-May-2026 16:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605051600.mat  7 % good
plotted: VIIRS_NPP 2026050516 7% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050516.gif
region 2 SNSW record 3/19 at 10-May-2026 05:43:53LT, image time: 06-May-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605060240.mat  9 % good
plotted: VIIRS_NPP 2026050602 9% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050602.gif
region 2 SNSW record 4/19 at 10-May-2026 05:44:00LT, image time: 06-May-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605060300.mat  18 % good
plotted: VIIRS_N20 2026050603 18% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050603.gif
region 2 SNSW record 5/19 at 10-May-2026 05:44:06LT, image time: 06-May-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605060420.mat  19 % good
plotted: VIIRS_NPP 2026050604 19% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050604.gif
region 2 SNSW record 6/19 at 10-May-2026 05:44:12LT, image time: 06-May-2026 04:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605060440.mat  9 % good
plotted: VIIRS_N20 2026050604 9% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050604.gif
region 2 SNSW record 7/19 at 10-May-2026 05:44:18LT, image time: 06-May-2026 14:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605061400.mat  11 % good
plotted: VIIRS_NPP 2026050614 11% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050614.gif
region 2 SNSW record 8/19 at 10-May-2026 05:44:23LT, image time: 06-May-2026 14:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605061420.mat  18 % good
plotted: VIIRS_N20 2026050614 18% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050614.gif
region 2 SNSW record 9/19 at 10-May-2026 05:44:27LT, image time: 06-May-2026 15:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605061540.mat  20 % good
plotted: VIIRS_NPP 2026050615 20% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050615.gif
region 2 SNSW record 10/19 at 10-May-2026 05:44:32LT, image time: 06-May-2026 16:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605061600.mat  7 % good
plotted: VIIRS_N20 2026050616 7% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050616.gif
region 2 SNSW record 11/19 at 10-May-2026 05:44:36LT, image time: 07-May-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605070240.mat  8 % good
plotted: VIIRS_N20 2026050702 8% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050702.gif
region 2 SNSW record 12/19 at 10-May-2026 05:44:41LT, image time: 07-May-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605070420.mat  9 % good
plotted: VIIRS_N20 2026050704 9% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050704.gif
region 2 SNSW record 13/19 at 10-May-2026 05:44:45LT, image time: 07-May-2026 14:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605071400.mat  5 % good
plotted: VIIRS_N20 2026050714 5% new good 96% total good
/home/vamp1/pub_web/analysis/SNSW/2026050714.gif
region 2 SNSW record 14/19 at 10-May-2026 05:44:51LT, image time: 07-May-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605071520.mat  5 % good
plotted: VIIRS_NPP 2026050715 5% new good 95% total good
/home/vamp1/pub_web/analysis/SNSW/2026050715.gif
region 2 SNSW record 15/19 at 10-May-2026 05:44:56LT, image time: 07-May-2026 15:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605071540.mat  4 % good
plotted: VIIRS_N20 2026050715 4% new good 95% total good
/home/vamp1/pub_web/analysis/SNSW/2026050715.gif
region 2 SNSW record 16/19 at 10-May-2026 05:45:01LT, image time: 08-May-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605080400.mat  20 % good
plotted: VIIRS_N20 2026050804 20% new good 94% total good
/home/vamp1/pub_web/analysis/SNSW/2026050804.gif
region 2 SNSW record 17/19 at 10-May-2026 05:45:06LT, image time: 08-May-2026 15:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605081500.mat  10 % good
plotted: VIIRS_NPP 2026050815 10% new good 94% total good
/home/vamp1/pub_web/analysis/SNSW/2026050815.gif
region 2 SNSW record 18/19 at 10-May-2026 05:45:09LT, image time: 08-May-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605081520.mat  8 % good
plotted: VIIRS_N20 2026050815 8% new good 89% total good
/home/vamp1/pub_web/analysis/SNSW/2026050815.gif
region 2 SNSW record 19/19 at 10-May-2026 05:45:13LT, image time: 09-May-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202605090340.mat  7 % good
plotted: VIIRS_N20 2026050903 7% new good 89% total good
/home/vamp1/pub_web/analysis/SNSW/2026050903.gif
ls /home/vamp1/pub_web/analysis/SNSW//*.gif
mfli =
    'SNSW202605.fli'
/home/griffin/scripts/gifs2fliMC89.sh SNSW202605.fli 150  2026050102.gif 2026050104.gif 2026050110.gif 2026050114.gif 2026050121.gif 2026050202.gif 2026050203.gif 2026050204.gif 2026050311.gif 2026050314.gif 2026050315.gif 2026050514.gif 2026050516.gif 2026050602.gif 2026050603.gif 2026050604.gif 2026050614.gif 2026050615.gif 2026050616.gif 2026050702.gif 2026050704.gif 2026050714.gif 2026050715.gif 2026050804.gif 2026050815.gif 2026050903.gif
/home/griffin/scripts/fli2videoMC.sh SNSW202605.fli 7
10-May-2026 05:45:23 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SNSW/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SNSW
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/SNSW/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/SNSW
rsync took 0.124mins
 
ls /home/vamp1/pub_web/analysis/L3U_pcg//*.gif
No gifs for date range: 01 May 2026 - 31 May 2026
cat: index.head: No such file or directory
10-May-2026 05:45:41 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli L3U_pcg/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/L3U_pcg
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/L3U_pcg/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/L3U_pcg
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/L3U_pcg/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/L3U_pcg
23 building file list ... 
rsync: [sender] change_dir "/home/vamp1/pub_web/analysis/SnapshotSST/TAGS/L3U_pcg" failed: No such file or directory (2)
done

sent 35 bytes  received 20 bytes  110.00 bytes/sec
total size is 0  speedup is 0.00
rsync error: some files/attrs were not transferred (see previous errors) (code 23) at main.c(1338) [sender=3.2.7]

rsync took 0.0323mins
 
On the third stroke, it will be 10-May-2026 05:45:43
Plotting 4 regions took 0.259h. rsyncing took 0.72mins (0.18mins/region avg). Thredds retries: 0
\rm /home/vamp1/intranet/cronlogs/DG/psst/202603*.html
\rm /home/vamp1/intranet/cronlogs/DG/psst/202603*.html
1 rm: cannot remove '/home/vamp1/intranet/cronlogs/DG/psst/202603*.html': No such file or directory

finishing at 10-May-2026 05:45:43