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                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
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running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :64
[Warning: MATLAB has disabled some advanced graphics rendering features by
switching to software OpenGL. For more information, click here.] 
The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
psst_OC starting job nrtsst at 22-Mar-2026 05:30:13 on oc3-hba

usesats =
          2.00          3.00         18.00         19.00         20.00
Looking for data in range:
15-Mar-2026 18:30:13
21-Mar-2026 18:30:13
ans =
  4x18 char array
    'Bris3_   Brisbane2'
    'Bris-Syd Bris-Syd '
    'Coffs    Coffs    '
    'SNSW     SNSW     '
first read
--2026-03-22 05:30:13--  http://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2026-02-13T18%3A30%3A13+AND+TIME+%3C%3D+2026-03-21T18%3A30%3A13+AND+TEMP_b+%3D+true
Resolving geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)... 13.238.63.111, 15.135.106.66, 13.210.93.32
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|13.238.63.111|:80... connected.
HTTP request sent, awaiting response... 301 Moved Permanently
Location: https://geoserver-123.aodn.org.au:443/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2026-02-13T18%3A30%3A13+AND+TIME+%3C%3D+2026-03-21T18%3A30%3A13+AND+TEMP_b+%3D+true [following]
--2026-03-22 05:30:14--  https://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2026-02-13T18%3A30%3A13+AND+TIME+%3C%3D+2026-03-21T18%3A30%3A13+AND+TEMP_b+%3D+true
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|13.238.63.111|:443... connected.
HTTP request sent, awaiting response... 200 
Length: unspecified [text/csv]
Saving to: ‘/tmp/tpa46c8c68_1a17_4387_93d9_8ca1894c2405.csv’


          /tmp/tpa4     [<=>                 ]       0  --.-KB/s               
         /tmp/tpa46     [ <=>                ]   1.76M  8.80MB/s               
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       /tmp/tpa46c8     [   <=>              ]   4.64M  7.71MB/s               
      /tmp/tpa46c8c     [    <=>             ]   6.14M  7.62MB/s               
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   /tmp/tpa46c8c68_     [       <=>          ]  10.68M  7.58MB/s               
  /tmp/tpa46c8c68_1     [        <=>         ]  12.15M  7.55MB/s               
 /tmp/tpa46c8c68_1a     [         <=>        ]  13.64M  7.53MB/s               
/tmp/tpa46c8c68_1a1     [          <=>       ]  15.15M  7.53MB/s               
tmp/tpa46c8c68_1a17     [           <=>      ]  16.69M  7.54MB/s               
mp/tpa46c8c68_1a17_     [            <=>     ]  18.18M  7.54MB/s               
p/tpa46c8c68_1a17_4     [             <=>    ]  19.68M  7.53MB/s               
/tpa46c8c68_1a17_43     [              <=>   ]  21.13M  7.49MB/s               
tpa46c8c68_1a17_438     [               <=>  ]  22.66M  7.50MB/s               
pa46c8c68_1a17_4387     [                <=> ]  24.17M  7.42MB/s               
a46c8c68_1a17_4387_     [                 <=>]  25.68M  7.42MB/s               
/tmp/tpa46c8c68_1a1     [                <=> ]  26.58M  7.48MB/s    in 3.5s    

2026-03-22 05:30:22 (7.51 MB/s) - ‘/tmp/tpa46c8c68_1a17_4387_93d9_8ca1894c2405.csv’ saved [27873557]

FINISHED --2026-03-22 05:30:22--
Total wall clock time: 9.0s
Downloaded: 1 files, 27M in 3.5s (7.51 MB/s)
SOOP dates, sst, lat, lon, latf, lonf
1 13-Feb 19Z - 01-Mar 02Z, 27.3       29.9      -10.6       1.72      103.6      147.1        NaN        NaN        NaN        NaN
2 13-Feb 19Z - 20-Mar 23Z, 28.6       31.3     -14.14      -0.26      126.2      135.1     -14.14      -6.33      126.2      131.3
3 14-Feb 00Z - 19-Mar 23Z, 20.3      24.76        -32     -31.82      115.5      115.7     -31.96     -31.84      115.6      115.7
4 13-Feb 19Z - 20-Mar 23Z, 28       30.7     -13.37      -9.49      141.5        144     -10.59      -9.53      142.1        144
5 13-Feb 19Z - 20-Mar 23Z, 15.1         30     -39.27      13.07      100.7      153.8        4.7      13.07      100.7      104.2
6 13-Feb 18Z - 19-Mar 11Z, 26.31       31.8     -23.89     -16.11      145.5        152     -23.86     -23.43      151.2        152
7 15-Feb 23Z - 19-Mar 11Z, 27.21      32.85     -19.26     -9.535      130.7      147.3     -12.48     -10.21      130.8      143.1
8 13-Feb 19Z - 20-Mar 23Z, 18.1       22.6     -41.18     -38.08      144.4      146.4     -41.18     -38.08      144.4      146.4
 
reading ACORN data at 22-Mar-2026 05:30:24
                                          
             
ROT _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheROT_non-QC2026.mat                           
had 1491 records from 01-Jan-2026 00:00:00 to 20-Mar-2026 04:00:00 = 79% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/ROT/2026/catalog.xml'
tcatal =
          9.25
Found 1491 in catalog, 1491 for _ROT_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
             
SAG _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheSAG_non-QC2026.mat                           
had 1015 records from 01-Jan-2026 00:30:00 to 21-Mar-2026 05:30:00 = 53% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/SAG/2026/catalog.xml'
tcatal =
          6.89
Found 1022 in catalog, 1022 for _SAG_. 7 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260321T063000Z_SAG_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260321T153000Z_SAG_FV00_1-hour-avg.nc
22-Mar-2026 05:30:50 IMOS_ACORN_V_20260321T063000Z_SAG_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheSAG_non-QC2026.mat
22-Mar-2026 05:30:56 IMOS_ACORN_V_20260321T083000Z_SAG_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:31:01 IMOS_ACORN_V_20260321T093000Z_SAG_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:31:06 IMOS_ACORN_V_20260321T103000Z_SAG_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:31:12 IMOS_ACORN_V_20260321T113000Z_SAG_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:31:16 IMOS_ACORN_V_20260321T123000Z_SAG_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:31:21 IMOS_ACORN_V_20260321T153000Z_SAG_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheSAG_non-QC2026.mat
Took 1min =0h to read data for 21-Mar-2026 06:30:00 - 21-Mar-2026 15:30:00
                                                                                                
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheSAG_non-QC2026.mat                               
now has 1022 records from 01-Jan-2026 00:30:00 to 21-Mar-2026 15:30:00 = 53% complete for period
              
NEWC _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat                          
had 1269 records from 01-Jan-2026 00:00:00 to 21-Mar-2026 02:00:00 = 67% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/NEWC/2026/catalog.xml'
tcatal =
          8.07
Found 1269 in catalog, 1269 for _NEWC_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
              
TURQ _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat                          
had 1642 records from 01-Jan-2026 00:00:00 to 20-Mar-2026 04:00:00 = 88% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/TURQ/2026/catalog.xml'
tcatal =
          8.66
Found 1642 in catalog, 1642 for _TURQ_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
              
CORL _non-QC 1
                                                                                           
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCORL_non-QC2026.mat                         
had 523 records from 24-Feb-2026 23:00:00 to 21-Mar-2026 05:00:00 = 90% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/CORL/2026/catalog.xml'
tcatal =
          3.18
Found 533 in catalog, 533 for _CORL_. 10 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260321T060000Z_CORL_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260321T150000Z_CORL_FV00_1-hour-avg.nc
Reading 10 then estimating time to read them all:
22-Mar-2026 05:31:53 IMOS_ACORN_V_20260321T060000Z_CORL_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheCORL_non-QC2026.mat
22-Mar-2026 05:31:58 IMOS_ACORN_V_20260321T070000Z_CORL_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:32:03 IMOS_ACORN_V_20260321T080000Z_CORL_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:32:09 IMOS_ACORN_V_20260321T090000Z_CORL_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:32:14 IMOS_ACORN_V_20260321T100000Z_CORL_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:32:19 IMOS_ACORN_V_20260321T110000Z_CORL_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:32:24 IMOS_ACORN_V_20260321T120000Z_CORL_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:32:29 IMOS_ACORN_V_20260321T130000Z_CORL_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:32:34 IMOS_ACORN_V_20260321T140000Z_CORL_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:32:39 IMOS_ACORN_V_20260321T150000Z_CORL_FV00_1-hour-avg.nc had 1 records
reading 10 files will take about 1min =0h
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheCORL_non-QC2026.mat
Took 1min =0h to read data for 21-Mar-2026 06:00:00 - 21-Mar-2026 15:00:00
                                                                                               
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCORL_non-QC2026.mat                             
now has 533 records from 24-Feb-2026 23:00:00 to 21-Mar-2026 15:00:00 = 90% complete for period
             
NWA _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat                           
had 1272 records from 01-Jan-2026 00:30:00 to 21-Mar-2026 05:30:00 = 67% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/NWA/2026/catalog.xml'
tcatal =
          8.29
Found 1281 in catalog, 1281 for _NWA_. 9 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260321T063000Z_NWA_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260321T163000Z_NWA_FV00_1-hour-avg.nc
22-Mar-2026 05:32:56 IMOS_ACORN_V_20260321T063000Z_NWA_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat
22-Mar-2026 05:33:02 IMOS_ACORN_V_20260321T073000Z_NWA_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:33:07 IMOS_ACORN_V_20260321T083000Z_NWA_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:33:12 IMOS_ACORN_V_20260321T093000Z_NWA_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:33:17 IMOS_ACORN_V_20260321T103000Z_NWA_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:33:22 IMOS_ACORN_V_20260321T113000Z_NWA_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:33:28 IMOS_ACORN_V_20260321T133000Z_NWA_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:33:33 IMOS_ACORN_V_20260321T143000Z_NWA_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:33:38 IMOS_ACORN_V_20260321T163000Z_NWA_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat
Took 1min =0h to read data for 21-Mar-2026 06:30:00 - 21-Mar-2026 16:30:00
                                                                                                
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat                               
now has 1281 records from 01-Jan-2026 00:30:00 to 21-Mar-2026 16:30:00 = 67% complete for period
             
COF _non-QC 1
                                                                                            
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCOF_non-QC2026.mat                           
had 1649 records from 01-Jan-2026 00:30:00 to 21-Mar-2026 05:30:00 = 87% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/COF/2026/catalog.xml'
tcatal =
          8.35
Found 1659 in catalog, 1659 for _COF_. 10 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260321T063000Z_COF_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260321T153000Z_COF_FV00_1-hour-avg.nc
Reading 10 then estimating time to read them all:
22-Mar-2026 05:33:56 IMOS_ACORN_V_20260321T063000Z_COF_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheCOF_non-QC2026.mat
22-Mar-2026 05:34:05 IMOS_ACORN_V_20260321T073000Z_COF_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:34:11 IMOS_ACORN_V_20260321T083000Z_COF_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:34:16 IMOS_ACORN_V_20260321T093000Z_COF_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:34:22 IMOS_ACORN_V_20260321T103000Z_COF_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:34:28 IMOS_ACORN_V_20260321T113000Z_COF_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:34:34 IMOS_ACORN_V_20260321T123000Z_COF_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:34:39 IMOS_ACORN_V_20260321T133000Z_COF_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:34:45 IMOS_ACORN_V_20260321T143000Z_COF_FV00_1-hour-avg.nc had 1 records
22-Mar-2026 05:34:50 IMOS_ACORN_V_20260321T153000Z_COF_FV00_1-hour-avg.nc had 1 records
reading 10 files will take about 1min =0h
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheCOF_non-QC2026.mat
Took 1min =0h to read data for 21-Mar-2026 06:30:00 - 21-Mar-2026 15:30:00
                                                                                                
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCOF_non-QC2026.mat                               
now has 1659 records from 01-Jan-2026 00:30:00 to 21-Mar-2026 15:30:00 = 87% complete for period
Finished reading ACORN data at 22-Mar-2026 05:34:55
                                                   
reading 7 drifter files
interpolating 1 drifters
getting nrt Argo
Found 176 profiles
                                                                                       
loaded Argo data for 176 profiles, spanning 10-Mar-2026 20:57:20 - 21-Mar-2026 02:20:18
                                                                                       
Reading 114 MNF files and binning at 15-min intervals
Found 453 ship data points in lat, lon range-32  -22  112  116 from 16-Mar-2026 23:33:30 to 21-Mar-2026 16:53:30
count, min, max, median SST: 453   21   28   27
glf =
    'nrt_all_v8'
gltypes =
  1x2 cell array
    {'seaglider'}    {'slocum_glider'}
update from thredds?: 1
loaded data for 69 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/nrt_all_v8. Last10:
BassStrait20260316   16 21-Mar-2026 18:36:25 
Portland20260310     32 21-Mar-2026 10:34:23 
TwoRocks20260116     0 31-Dec-1999 
PortLincoln20260210  22 04-Mar-2026 10:35:29 
PortLincoln20260123  0 31-Dec-1999 
MissionBeach20260220 73 21-Mar-2026 18:36:43 
MissionBeach20260115 0 31-Dec-1999 
Forster20260122      0 31-Dec-1999 
PortLincoln20250529  57 17-Jun-2025 10:33:31 
TwoRocks20250515     1 24-May-2025 05:37:11 
Portland20250522     1 22-May-2025 18:35:29 
  folder       nfol datespan   nnow reading
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/seaglider/catalog.xml'
list_thredds_folders FAILED
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/slocum_glider/catalog.xml'
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/BassStrait20260316/IMOS_ANFOG_BCEOSTUV_20260316T030732Z_SL1227_FV00_timeseries_END-20260321T153636Z.nc'}
                                                                                
22-Mar-2026 05:36:03 Found 1 .nc files in IMOS/ANFOG/REALTIME/BassStrait20260316
BassStrait20260316   had data til 21-Mar-2026 03:34:42
not checking for gap-filling files
found 1 uncached .nc files in timerange for BassStrait20260316
BassStrait20260316 1: 16-Mar-2026 - 21-Mar-2026 1: 16-Mar-2026 03:07:32 - 21-Mar-2026 15:36:36
had already: 16:  16-Mar-2026 03:17:01 - 21-Mar-2026 03:34:42
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/BassStrait20260316/IMOS_ANFOG_BCEOSTUV_20260316T030732Z_SL1227_FV00_timeseries_END-20260321T153636Z.nc
max(julall)= 21-Mar-2026 15:36:36
length(julall)= 25759
range(find(cndci>2))= 2  25708
range(find(julall>maxjulj))= 24296  25759
2026-03-21T18:02:08Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
1412 1409 34      
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 168.56        227.99       248.497
expected 1412 records with 0>depth<3000 but found only 1142 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/BassStrait20260316/IMOS_ANFOG_BCEOSTUV_20260316T030732Z_SL1227_FV00_timeseries_END-20260321T153636Z.nc
slocum_glider BassStrait20260316   has 17 dives in area 147 147 -41 -40 during 16-Mar-2026 03:17:01 to 21-Mar-2026 13:39:21
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Forster20260122/IMOS_ANFOG_BCEOSTUV_20260121T213506Z_SL995_FV00_timeseries_END-20260204T100426Z.nc'}
                                                                             
22-Mar-2026 05:36:25 Found 1 .nc files in IMOS/ANFOG/REALTIME/Forster20260122
Forster20260122      had data til 
not checking for gap-filling files
found 0 uncached .nc files in timerange for Forster20260122
Forster20260122 1: 21-Jan-2026 - 04-Feb-2026 0:  - 
slocum_glider Forster20260122      had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260220/IMOS_ANFOG_BCEOSTUV_20260220T001753Z_SL209_FV00_timeseries_END-20260321T172123Z.nc'}
                                                                                  
22-Mar-2026 05:36:26 Found 1 .nc files in IMOS/ANFOG/REALTIME/MissionBeach20260220
MissionBeach20260220 had data til 21-Mar-2026 05:24:54
not checking for gap-filling files
found 1 uncached .nc files in timerange for MissionBeach20260220
MissionBeach20260220 1: 20-Feb-2026 - 21-Mar-2026 1: 20-Feb-2026 00:17:53 - 21-Mar-2026 17:21:23
had already: 73:  20-Feb-2026 00:28:49 - 21-Mar-2026 05:24:54
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260220/IMOS_ANFOG_BCEOSTUV_20260220T001753Z_SL209_FV00_timeseries_END-20260321T172123Z.nc
max(julall)= 21-Mar-2026 17:21:23
length(julall)= 58488
range(find(cndci>2))= 2  58488
range(find(julall>maxjulj))= 57503  58488
2026-03-21T17:48:30Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
986 973 715       
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 0  0  0
expected 986 records with 0>depth<3000 but found only 893 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260220/IMOS_ANFOG_BCEOSTUV_20260220T001753Z_SL209_FV00_timeseries_END-20260321T172123Z.nc
slocum_glider MissionBeach20260220 has 74 dives in area 146 147 -18.1 -16.5 during 20-Feb-2026 00:28:49 to 21-Mar-2026 16:38:22
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/PortLincoln20260123/IMOS_ANFOG_BCEOSTUV_20260123T010420Z_SL248_FV00_timeseries_END-20260218T213940Z.nc'}
                                                                                 
22-Mar-2026 05:36:43 Found 1 .nc files in IMOS/ANFOG/REALTIME/PortLincoln20260123
PortLincoln20260123  had data til 
not checking for gap-filling files
found 0 uncached .nc files in timerange for PortLincoln20260123
PortLincoln20260123 1: 23-Jan-2026 - 18-Feb-2026 0:  - 
slocum_glider PortLincoln20260123  had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/PortLincoln20260210/IMOS_ANFOG_BCEOSTUV_20260210T004400Z_SL1212_FV00_timeseries_END-20260303T221506Z.nc'}
                                                                                 
22-Mar-2026 05:36:44 Found 1 .nc files in IMOS/ANFOG/REALTIME/PortLincoln20260210
PortLincoln20260210  had data til 03-Mar-2026 21:04:31
not checking for gap-filling files
found 0 uncached .nc files in timerange for PortLincoln20260210
PortLincoln20260210 1: 10-Feb-2026 - 03-Mar-2026 0:  - 
had already: 22:  10-Feb-2026 00:51:00 - 03-Mar-2026 21:04:31
slocum_glider PortLincoln20260210  had no new data in the time period
........
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Portland20250522/IMOS_ANFOG_BCEOSTUV_20250522T014642Z_SL287_FV00_timeseries_END-20250522T025759Z.nc'}
                                                                              
22-Mar-2026 05:36:44 Found 1 .nc files in IMOS/ANFOG/REALTIME/Portland20250522
Portland20250522     had data til 22-May-2025 02:57:59
not checking for gap-filling files
found 0 uncached .nc files in timerange for Portland20250522
Portland20250522 1: 22-May-2025 - 22-May-2025 0:  - 
had already: 1:  22-May-2025 01:59:59 - 22-May-2025 02:57:59
slocum_glider Portland20250522     had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Portland20260310/IMOS_ANFOG_BCEOSTUV_20260309T235218Z_SL994_FV00_timeseries_END-20260321T143659Z.nc'}
                                                                              
22-Mar-2026 05:36:44 Found 1 .nc files in IMOS/ANFOG/REALTIME/Portland20260310
Portland20260310     had data til 20-Mar-2026 15:44:50
not checking for gap-filling files
found 1 uncached .nc files in timerange for Portland20260310
Portland20260310 1: 09-Mar-2026 - 21-Mar-2026 1: 09-Mar-2026 23:52:18 - 21-Mar-2026 14:36:59
had already: 32:  09-Mar-2026 23:58:58 - 20-Mar-2026 15:44:50
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/Portland20260310/IMOS_ANFOG_BCEOSTUV_20260309T235218Z_SL994_FV00_timeseries_END-20260321T143659Z.nc
max(julall)= 21-Mar-2026 14:36:59
length(julall)= 54218
range(find(cndci>2))= 2  54161
range(find(julall>maxjulj))= 50195  54218
2026-03-21T16:51:34Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
3966 3964 79      
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 224.558       226.524       241.382
expected 3966 records with 0>depth<3000 but found only 3668 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/Portland20260310/IMOS_ANFOG_BCEOSTUV_20260309T235218Z_SL994_FV00_timeseries_END-20260321T143659Z.nc
slocum_glider Portland20260310     has 33 dives in area 140 141 -38.4 -37.9 during 09-Mar-2026 23:58:58 to 21-Mar-2026 12:04:10
                                                                       
MISSING/RENAMED/REPROCESSED MISSIONS: (in the cache but not at thredds)
BassStrait20210716  
MissionBeach20220921
Portland20220826    
Portland20220922    
TwoRocks20210719    
TwoRocks20210812    
TwoRocks20220916    
Forster20221003     
Cooktown20221117    
Yamba20221123       
TwoRocks20221125    
Forster20230217     
MissionBeach20230203
MurrayPlume20230225 
Sydney20230301      
TasWestCoast20230405
ScottReef120230424  
ScottReef220230424  
ScottReef320230424  
BassStrait20230518  
Cairns20230608      
TwoRocks20230613    
Cairns20230628      
Forster220230714    
Forster20230718     
TwoRocks20230817    
TwoRocks20230830    
MissionBeach20231005
Forster20231010     
BassStrait20231109  
TasEastCoast20231207
BassStrait20240520  
Forster20240220     
Forster20240517     
Forster20240621     
TwoRocks20240308    
MissionBeach20240713
TwoRocks20240808    
TasEastCoast20240829
MissionBeach20240920
Forster20241030     
TasEastCoast20241031
Yamba20241031       
Onslow20241119      
Forster20241128     
Yamba20241113       
MissionBeach20250110
TwoRocks20250123    
Ningaloo20250129    
Onslow20250129      
TwoRocks20250219    
Forster20250225     
Onslow20250225      
Portland20250312    
Esperance20250327   
Ningaloo20250402    
BassStrait20250501  
Forster20250507     
TwoRocks20250515    
PortLincoln20250529 
MissionBeach20260115
TwoRocks20260116    
        
summary:
Finished reading nrt_all_v8 ANFOG (glider) data at 22-Mar-2026 05:37:10
                                                                       
                                                             
Doing region 46 Bris3_ (1/4) starting at 22-Mar-2026 05:37:11
Looking for data in range:
ans =
    '15-Mar-2026 18:30:13'
ans =
    '21-Mar-2026 18:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/
Browser URL:  https://mrs-data.csiro.au/thredds/catalog/imos-srs/sst/ghrsst/L3U/catalog.html
ghrsstFS =
    'https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/'
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8 with pcgood for 10-Mar-2019 00:08:59 - 20-Mar-2026 13:34:03
Found 294888 /RT files in the whole indexcache. Fixed 0 filenames with no .gz
changed 0 file extensions from .nc.gz to .nc4
/usr/local/bin/xwget.sh -O 202603220537index.nc -N -t 4 https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3U/index.nc
maxage =
      12497.51
202603220537index.nc has 963555 records, the first and last have date, satnum:
02-Jan-1992 06:21:59 (NOAA11)
28-Feb-2026 23:28:03 (NOAA3)
The earliest and latest SST data are 34yr and 499 h old, for
02-Jan-1992 06:21:59 (NOAA11)
28-Feb-2026 23:28:03 (NOAA3)
sat numbers are: 2   3   9  11  12  14  15  16  17  18  19  20
in last 200 files: 3  20
reading 0 files  will take about 0min =0h at 7s each
not updating /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8. (updateSST=1 length(fi)=0)
/home/vamp1/pub_web/analysis/L3U_pcg/2026032205.tif
\rm 202603220537index.nc
L3U available to 20-Mar-2026 13:34:03(=29h old)
20 cached images are in the time-window, as are 965 files at thredds. 4 of those have sufficient %good.
seeking earlier data
reading
    'in2023_v06/proc/wh75/contour/wh75'
 
/home/vamp1/sco243/investigator_adcp/in2023_v06/proc/wh75/contour/wh75.nc
Cruise area: 151       158     -38.9     -31.9
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260318, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
06-Mar-2026 12:00:00
07-Mar-2026 12:00:00
18-Mar-2026 12:00:00
haverun =
    'CMRNRT'
region =
        151.75        156.65        -30.45        -25.75
152        0.2      156.4 -30.2        0.2        -26
nav 0
CLNAME - "CARS_latest" version being used by default.
[  This warning once per session only  ]
shipstride =
          3.00
region 46 Bris3_ record 1/20 at 22-Mar-2026 05:37:29LT, image time: 16-Mar-2026 03:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603160350.mat  19 % good
plotted: VIIRS_N20 2026031603 19% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 46 Bris3_ record 2/20 at 22-Mar-2026 05:37:31LT, image time: 16-Mar-2026 11:28:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603161128.mat  9 % good
plotted: NOAA _M 2026031611 9% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 46 Bris3_ record 3/20 at 22-Mar-2026 05:37:32LT, image time: 16-Mar-2026 15:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603161510.mat  5 % good
plotted: VIIRS_N20 2026031615 5% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260317.mat and preceding do not exist
region 46 Bris3_ record 4/20 at 22-Mar-2026 05:37:33LT, image time: 17-Mar-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603170340.mat  7 % good
plotted: VIIRS_N20 2026031703 7% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260317.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026031703.gif
region 46 Bris3_ record 5/20 at 22-Mar-2026 05:37:37LT, image time: 17-Mar-2026 11:07:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603171107.mat  9 % good
plotted: NOAA _M 2026031711 9% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260317.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026031711.gif
region 46 Bris3_ record 6/20 at 22-Mar-2026 05:37:40LT, image time: 17-Mar-2026 14:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603171450.mat  9 % good
plotted: VIIRS_N20 2026031714 9% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026031714.gif
region 46 Bris3_ record 7/20 at 22-Mar-2026 05:37:44LT, image time: 17-Mar-2026 22:22:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603172222.mat  10 % good
plotted: NOAA _M 2026031722 10% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026031722.gif
region 46 Bris3_ record 8/20 at 22-Mar-2026 05:37:47LT, image time: 18-Mar-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603180300.mat  8 % good
plotted: VIIRS_NPP 2026031803 8% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026031803.gif
region 46 Bris3_ record 9/20 at 22-Mar-2026 05:37:50LT, image time: 18-Mar-2026 03:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603180320.mat  6 % good
plotted: VIIRS_N20 2026031803 6% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026031803.gif
region 46 Bris3_ record 10/20 at 22-Mar-2026 05:37:52LT, image time: 18-Mar-2026 10:46:03Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                            
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
region 46 Bris3_ record 11/20 at 22-Mar-2026 05:38:42LT, image time: 18-Mar-2026 14:10:00Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                            
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260319.mat and preceding do not exist
region 46 Bris3_ record 12/20 at 22-Mar-2026 05:39:31LT, image time: 18-Mar-2026 14:30:00Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                            
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260319.mat and preceding do not exist
region 46 Bris3_ record 13/20 at 22-Mar-2026 05:40:20LT, image time: 19-Mar-2026 10:25:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603191025.mat  2 % good
plotted: NOAA _M 2026031910 2% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260319.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026031910.gif
region 46 Bris3_ record 14/20 at 22-Mar-2026 05:40:22LT, image time: 19-Mar-2026 14:10:00Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                          
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
region 46 Bris3_ record 15/20 at 22-Mar-2026 05:41:11LT, image time: 20-Mar-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603200240.mat  13 % good
plotted: VIIRS_N20 2026032002 13% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026032002.gif
region 46 Bris3_ record 16/20 at 22-Mar-2026 05:41:14LT, image time: 20-Mar-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603200400.mat  19 % good
plotted: VIIRS_NPP 2026032004 19% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026032004.gif
region 46 Bris3_ record 17/20 at 22-Mar-2026 05:41:16LT, image time: 20-Mar-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603200420.mat  9 % good
plotted: VIIRS_N20 2026032004 9% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026032004.gif
region 46 Bris3_ record 18/20 at 22-Mar-2026 05:41:19LT, image time: 20-Mar-2026 10:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603201004.mat  23 % good
plotted: NOAA _M 2026032010 23% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026032010.gif
region 46 Bris3_ record 19/20 at 22-Mar-2026 05:41:21LT, image time: 20-Mar-2026 11:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603201143.mat  22 % good
plotted: NOAA _M 2026032011 22% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026032011.gif
region 46 Bris3_ record 20/20 at 22-Mar-2026 05:41:24LT, image time: 20-Mar-2026 11:46:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202603201146.mat  8 % good
plotted: NOAA _M 2026032011 8% new good 75% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris3_/2026032011.gif
ls /home/vamp1/pub_web/analysis/Bris3_//*.gif
mfli =
    'Bris3_202603.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris3_202603.fli 150  2026030103.gif 2026030111.gif 2026030114.gif 2026030122.gif 2026030203.gif 2026030211.gif 2026030214.gif 2026030215.gif 2026030222.gif 2026030302.gif 2026030303.gif 2026030310.gif 2026030313.gif 2026030314.gif 2026030315.gif 2026030322.gif 2026030402.gif 2026030404.gif 2026030413.gif 2026030415.gif 2026030503.gif 2026030504.gif 2026030511.gif 2026030603.gif 2026030611.gif 2026030615.gif 2026030622.gif 2026030703.gif 2026030711.gif 2026030714.gif 2026030921.gif 2026031004.gif 2026031010.gif 2026031011.gif 2026031013.gif 2026031015.gif 2026031103.gif 2026031111.gif 2026031115.gif 2026031203.gif 2026031211.gif 2026031214.gif 2026031222.gif 2026031303.gif 2026031402.gif 2026031410.gif 2026031414.gif 2026031510.gif 2026031511.gif 2026031513.gif 2026031515.gif 2026031603.gif 2026031611.gif 2026031615.gif 2026031703.gif 2026031711.gif 2026031714.gif 2026031722.gif 2026031803.gif 2026031910.gif 2026032002.gif 2026032004.gif 2026032010.gif 2026032011.gif
/home/griffin/scripts/fli2videoMC.sh Bris3_202603.fli 7
22-Mar-2026 05:41:37 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris3_/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris3_
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/Bris3_/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/Bris3_
rsync took 0.0374mins
 
filesmissing =
  4x142 char array
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc'
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc'
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc'
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc  '
there were 4 missing files so I will re-index the server for the next region
                                                               
Doing region 39 Bris-Syd (2/4) starting at 22-Mar-2026 05:41:39
Looking for data in range:
ans =
    '15-Mar-2026 18:30:13'
ans =
    '21-Mar-2026 18:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/
Browser URL:  https://mrs-data.csiro.au/thredds/catalog/imos-srs/sst/ghrsst/L3U/catalog.html
ghrsstFS =
    'https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/'
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8 with pcgood for 10-Mar-2019 00:08:59 - 20-Mar-2026 13:34:03
Found 294888 /RT files in the whole indexcache. Fixed 0 filenames with no .gz
changed 0 file extensions from .nc.gz to .nc4
/usr/local/bin/xwget.sh -O 202603220541index.nc -N -t 4 https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3U/index.nc
maxage =
      12497.51
202603220541index.nc has 963555 records, the first and last have date, satnum:
02-Jan-1992 06:21:59 (NOAA11)
28-Feb-2026 23:28:03 (NOAA3)
The earliest and latest SST data are 34yr and 499 h old, for
02-Jan-1992 06:21:59 (NOAA11)
28-Feb-2026 23:28:03 (NOAA3)
sat numbers are: 2   3   9  11  12  14  15  16  17  18  19  20
in last 200 files: 3  20
reading 0 files  will take about 0min =0h at 7s each
not updating /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8. (updateSST=1 length(fi)=0)
\rm 202603220541index.nc
L3U available to 20-Mar-2026 13:34:03(=29h old)
14 cached images are in the time-window, as are 965 files at thredds. 1 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260318, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
06-Mar-2026 12:00:00
07-Mar-2026 12:00:00
18-Mar-2026 12:00:00
haverun =
    'CMRNRT'
region =
        149.95        158.25        -35.05        -26.35
150.2        0.2        158 -34.8        0.2      -26.6
nav 0
shipstride =
          4.00
region 39 Bris-Syd record 1/10 at 22-Mar-2026 05:41:51LT, image time: 15-Mar-2026 23:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603152304.mat  22 % good
plotted: NOAA _M 2026031523 22% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 39 Bris-Syd record 2/10 at 22-Mar-2026 05:41:54LT, image time: 16-Mar-2026 03:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603160350.mat  11 % good
plotted: VIIRS_N20 2026031603 11% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 39 Bris-Syd record 3/10 at 22-Mar-2026 05:41:56LT, image time: 16-Mar-2026 11:28:03Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260316112803-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260316112803-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260316112803-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260316112803-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260316112803-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260316112803-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260316112803-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                            
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 39 Bris-Syd record 4/10 at 22-Mar-2026 05:42:46LT, image time: 18-Mar-2026 03:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603180320.mat  15 % good
plotted: VIIRS_N20 2026031803 15% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris-Syd/2026031803.gif
region 39 Bris-Syd record 5/10 at 22-Mar-2026 05:42:52LT, image time: 19-Mar-2026 21:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603192140.mat  6 % good
plotted: NOAA _M 2026031921 6% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris-Syd/2026031921.gif
region 39 Bris-Syd record 6/10 at 22-Mar-2026 05:42:57LT, image time: 20-Mar-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603200240.mat  14 % good
plotted: VIIRS_N20 2026032002 14% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris-Syd/2026032002.gif
region 39 Bris-Syd record 7/10 at 22-Mar-2026 05:43:02LT, image time: 20-Mar-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603200400.mat  17 % good
plotted: VIIRS_NPP 2026032004 17% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris-Syd/2026032004.gif
region 39 Bris-Syd record 8/10 at 22-Mar-2026 05:43:07LT, image time: 20-Mar-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603200420.mat  13 % good
plotted: VIIRS_N20 2026032004 13% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris-Syd/2026032004.gif
region 39 Bris-Syd record 9/10 at 22-Mar-2026 05:43:11LT, image time: 20-Mar-2026 10:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603201004.mat  14 % good
plotted: NOAA _M 2026032010 14% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris-Syd/2026032010.gif
region 39 Bris-Syd record 10/10 at 22-Mar-2026 05:43:16LT, image time: 20-Mar-2026 11:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202603201143.mat  34 % good
plotted: NOAA _M 2026032011 34% new good 69% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Bris-Syd/2026032011.gif
ls /home/vamp1/pub_web/analysis/Bris-Syd//*.gif
mfli =
    'Bris-Syd202603.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris-Syd202603.fli 150  2026030114.gif 2026030122.gif 2026030202.gif 2026030203.gif 2026030211.gif 2026030214.gif 2026030303.gif 2026030310.gif 2026030313.gif 2026030314.gif 2026030315.gif 2026030322.gif 2026030402.gif 2026030404.gif 2026030414.gif 2026030415.gif 2026030502.gif 2026030503.gif 2026030504.gif 2026030510.gif 2026030511.gif 2026030513.gif 2026030515.gif 2026030521.gif 2026030603.gif 2026030609.gif 2026030611.gif 2026030615.gif 2026030622.gif 2026030703.gif 2026030711.gif 2026030714.gif 2026030803.gif 2026030910.gif 2026030914.gif 2026030915.gif 2026031004.gif 2026031010.gif 2026031011.gif 2026031013.gif 2026031015.gif 2026031103.gif 2026031111.gif 2026031115.gif 2026031203.gif 2026031211.gif 2026031214.gif 2026031222.gif 2026031303.gif 2026031310.gif 2026031314.gif 2026031322.gif 2026031402.gif 2026031410.gif 2026031414.gif 2026031502.gif 2026031510.gif 2026031511.gif 2026031513.gif 2026031515.gif 2026031523.gif 2026031603.gif 2026031803.gif 2026031921.gif 2026032002.gif 2026032004.gif 2026032010.gif 2026032011.gif
/home/griffin/scripts/fli2videoMC.sh Bris-Syd202603.fli 7
22-Mar-2026 05:43:29 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris-Syd/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris-Syd
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/Bris-Syd/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/Bris-Syd
rsync took 0.156mins
 
filesmissing =
  5x142 char array
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260318104603-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc'
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260318141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc'
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260318143000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc'
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/RT/20260319141000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc  '
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/RT/20260316112803-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc'
there were 1 missing files so I will re-index the server for the next region
                                                            
Doing region 25 Coffs (3/4) starting at 22-Mar-2026 05:43:38
Looking for data in range:
ans =
    '15-Mar-2026 18:30:13'
ans =
    '21-Mar-2026 18:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/
Browser URL:  https://mrs-data.csiro.au/thredds/catalog/imos-srs/sst/ghrsst/L3U/catalog.html
ghrsstFS =
    'https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/'
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8 with pcgood for 10-Mar-2019 00:08:59 - 20-Mar-2026 13:34:03
Found 294888 /RT files in the whole indexcache. Fixed 0 filenames with no .gz
changed 0 file extensions from .nc.gz to .nc4
/usr/local/bin/xwget.sh -O 202603220543index.nc -N -t 4 https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3U/index.nc
maxage =
      12497.52
202603220543index.nc has 963555 records, the first and last have date, satnum:
02-Jan-1992 06:21:59 (NOAA11)
28-Feb-2026 23:28:03 (NOAA3)
The earliest and latest SST data are 34yr and 499 h old, for
02-Jan-1992 06:21:59 (NOAA11)
28-Feb-2026 23:28:03 (NOAA3)
sat numbers are: 2   3   9  11  12  14  15  16  17  18  19  20
in last 200 files: 3  20
reading 0 files  will take about 0min =0h at 7s each
not updating /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8. (updateSST=1 length(fi)=0)
\rm 202603220543index.nc
L3U available to 20-Mar-2026 13:34:03(=29h old)
15 cached images are in the time-window, as are 965 files at thredds. 0 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260318, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
06-Mar-2026 12:00:00
07-Mar-2026 12:00:00
18-Mar-2026 12:00:00
haverun =
    'CMRNRT'
region =
        152.15        155.45        -32.05        -28.95
152.4        0.2      155.2 -31.8        0.2      -29.2
nav 0
shipstride =
          2.00
region 25 Coffs record 1/10 at 22-Mar-2026 05:43:53LT, image time: 15-Mar-2026 23:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603152304.mat  33 % good
plotted: NOAA _M 2026031523 33% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 25 Coffs record 2/10 at 22-Mar-2026 05:43:54LT, image time: 16-Mar-2026 03:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603160350.mat  8 % good
plotted: VIIRS_N20 2026031603 8% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 25 Coffs record 3/10 at 22-Mar-2026 05:43:55LT, image time: 19-Mar-2026 14:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603191410.mat  8 % good
plotted: VIIRS_N20 2026031914 8% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Coffs/2026031914.gif
region 25 Coffs record 4/10 at 22-Mar-2026 05:43:57LT, image time: 19-Mar-2026 15:30:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603191530.mat  21 % good
plotted: VIIRS_NPP 2026031915 21% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Coffs/2026031915.gif
region 25 Coffs record 5/10 at 22-Mar-2026 05:44:00LT, image time: 19-Mar-2026 21:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603192140.mat  40 % good
plotted: NOAA _M 2026031921 40% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Coffs/2026031921.gif
region 25 Coffs record 6/10 at 22-Mar-2026 05:44:02LT, image time: 20-Mar-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603200240.mat  26 % good
plotted: VIIRS_N20 2026032002 26% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Coffs/2026032002.gif
region 25 Coffs record 7/10 at 22-Mar-2026 05:44:04LT, image time: 20-Mar-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603200400.mat  30 % good
plotted: VIIRS_NPP 2026032004 30% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Coffs/2026032004.gif
region 25 Coffs record 8/10 at 22-Mar-2026 05:44:06LT, image time: 20-Mar-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603200420.mat  25 % good
plotted: VIIRS_N20 2026032004 25% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Coffs/2026032004.gif
region 25 Coffs record 9/10 at 22-Mar-2026 05:44:08LT, image time: 20-Mar-2026 10:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603201004.mat  5 % good
plotted: NOAA _M 2026032010 5% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Coffs/2026032010.gif
region 25 Coffs record 10/10 at 22-Mar-2026 05:44:10LT, image time: 20-Mar-2026 11:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202603201143.mat  71 % good
plotted: NOAA _M 2026032011 71% new good 99% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/Coffs/2026032011.gif
ls /home/vamp1/pub_web/analysis/Coffs//*.gif
mfli =
    'Coffs202603.fli'
/home/griffin/scripts/gifs2fliMC89.sh Coffs202603.fli 150  2026030111.gif 2026030114.gif 2026030122.gif 2026030202.gif 2026030203.gif 2026030211.gif 2026030214.gif 2026030215.gif 2026030303.gif 2026030310.gif 2026030313.gif 2026030314.gif 2026030315.gif 2026030322.gif 2026030402.gif 2026030404.gif 2026030414.gif 2026030415.gif 2026030503.gif 2026030504.gif 2026030510.gif 2026030511.gif 2026030515.gif 2026030521.gif 2026030603.gif 2026030611.gif 2026030615.gif 2026030622.gif 2026030703.gif 2026030711.gif 2026030714.gif 2026030910.gif 2026030914.gif 2026030915.gif 2026030921.gif 2026031002.gif 2026031004.gif 2026031010.gif 2026031011.gif 2026031013.gif 2026031015.gif 2026031103.gif 2026031111.gif 2026031115.gif 2026031203.gif 2026031211.gif 2026031303.gif 2026031314.gif 2026031322.gif 2026031402.gif 2026031410.gif 2026031414.gif 2026031504.gif 2026031510.gif 2026031511.gif 2026031513.gif 2026031515.gif 2026031523.gif 2026031603.gif 2026031914.gif 2026031915.gif 2026031921.gif 2026032002.gif 2026032004.gif 2026032010.gif 2026032011.gif
/home/griffin/scripts/fli2videoMC.sh Coffs202603.fli 7
22-Mar-2026 05:44:19 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Coffs/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Coffs
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/Coffs/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/Coffs
rsync took 0.0274mins
 
                                                          
Doing region 2 SNSW (4/4) starting at 22-Mar-2026 05:44:21
Looking for data in range:
ans =
    '15-Mar-2026 18:30:13'
ans =
    '21-Mar-2026 18:30:13'
looking for AATAMS tag data:
wanted 01-Jan-2026 - 01-Jan-2027, scanning 2026
no tags found
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/
L3U available to 20-Mar-2026 13:34:03(=29h old)
22 cached images are in the time-window, as are 965 files at thredds. 0 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260318, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
06-Mar-2026 12:00:00
07-Mar-2026 12:00:00
18-Mar-2026 12:00:00
haverun =
    'CMRNRT'
region =
        148.75        156.25        -38.05        -30.95
149        0.2        156 -37.8        0.2      -31.2
nav 0
shipstride =
          4.00
region 2 SNSW record 1/16 at 22-Mar-2026 05:44:27LT, image time: 15-Mar-2026 21:25:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603152125.mat  16 % good
plotted: NOAA _M 2026031521 16% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 2 SNSW record 2/16 at 22-Mar-2026 05:44:28LT, image time: 15-Mar-2026 23:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603152304.mat  30 % good
plotted: NOAA _M 2026031523 30% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260316.mat and preceding do not exist
region 2 SNSW record 3/16 at 22-Mar-2026 05:44:30LT, image time: 17-Mar-2026 14:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603171450.mat  1 % good
plotted: VIIRS_N20 2026031714 1% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031714.gif
region 2 SNSW record 4/16 at 22-Mar-2026 05:44:34LT, image time: 18-Mar-2026 03:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603180310.mat  10 % good
plotted: VIIRS_N20 2026031803 10% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031803.gif
region 2 SNSW record 5/16 at 22-Mar-2026 05:44:37LT, image time: 18-Mar-2026 03:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603180320.mat  10 % good
plotted: VIIRS_N20 2026031803 10% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031803.gif
region 2 SNSW record 6/16 at 22-Mar-2026 05:44:41LT, image time: 18-Mar-2026 04:30:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603180430.mat  4 % good
plotted: VIIRS_NPP 2026031804 4% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260318.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031804.gif
region 2 SNSW record 7/16 at 22-Mar-2026 05:44:45LT, image time: 18-Mar-2026 14:30:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603181430.mat  4 % good
plotted: VIIRS_N20 2026031814 4% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260319.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031814.gif
region 2 SNSW record 8/16 at 22-Mar-2026 05:44:48LT, image time: 19-Mar-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603190300.mat  8 % good
plotted: VIIRS_N20 2026031903 8% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260319.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031903.gif
region 2 SNSW record 9/16 at 22-Mar-2026 05:44:52LT, image time: 19-Mar-2026 10:22:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603191022.mat  7 % good
plotted: NOAA _M 2026031910 7% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260319.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031910.gif
region 2 SNSW record 10/16 at 22-Mar-2026 05:44:56LT, image time: 19-Mar-2026 12:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603191204.mat  12 % good
plotted: NOAA _M 2026031912 12% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031912.gif
region 2 SNSW record 11/16 at 22-Mar-2026 05:44:59LT, image time: 19-Mar-2026 14:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603191420.mat  8 % good
plotted: VIIRS_N20 2026031914 8% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031914.gif
region 2 SNSW record 12/16 at 22-Mar-2026 05:45:03LT, image time: 19-Mar-2026 21:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603192143.mat  18 % good
plotted: NOAA _M 2026031921 18% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026031921.gif
region 2 SNSW record 13/16 at 22-Mar-2026 05:45:06LT, image time: 20-Mar-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603200240.mat  23 % good
plotted: VIIRS_N20 2026032002 23% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026032002.gif
region 2 SNSW record 14/16 at 22-Mar-2026 05:45:10LT, image time: 20-Mar-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603200400.mat  28 % good
plotted: VIIRS_NPP 2026032004 28% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026032004.gif
region 2 SNSW record 15/16 at 22-Mar-2026 05:45:13LT, image time: 20-Mar-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603200420.mat  28 % good
plotted: VIIRS_N20 2026032004 28% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026032004.gif
region 2 SNSW record 16/16 at 22-Mar-2026 05:45:17LT, image time: 20-Mar-2026 11:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202603201143.mat  73 % good
plotted: NOAA _M 2026032011 73% new good 97% total good
/home/vamp1/varney/gri159/IMOScache/fishsoop/tags/2026/20260320.mat and preceding do not exist
/home/vamp1/pub_web/analysis/SNSW/2026032011.gif
ls /home/vamp1/pub_web/analysis/SNSW//*.gif
mfli =
    'SNSW202603.fli'
/home/griffin/scripts/gifs2fliMC89.sh SNSW202603.fli 150  2026030114.gif 2026030202.gif 2026030203.gif 2026030314.gif 2026030322.gif 2026030402.gif 2026030404.gif 2026030414.gif 2026030415.gif 2026030503.gif 2026030504.gif 2026030510.gif 2026030511.gif 2026030513.gif 2026030515.gif 2026030521.gif 2026030603.gif 2026030611.gif 2026030615.gif 2026030622.gif 2026030703.gif 2026030704.gif 2026030814.gif 2026030902.gif 2026030910.gif 2026030914.gif 2026030915.gif 2026030921.gif 2026031002.gif 2026031004.gif 2026031010.gif 2026031011.gif 2026031013.gif 2026031015.gif 2026031103.gif 2026031111.gif 2026031115.gif 2026031203.gif 2026031211.gif 2026031310.gif 2026031314.gif 2026031322.gif 2026031402.gif 2026031404.gif 2026031410.gif 2026031412.gif 2026031414.gif 2026031415.gif 2026031421.gif 2026031502.gif 2026031504.gif 2026031511.gif 2026031513.gif 2026031515.gif 2026031521.gif 2026031523.gif 2026031714.gif 2026031803.gif 2026031804.gif 2026031814.gif 2026031903.gif 2026031910.gif 2026031912.gif 2026031914.gif 2026031921.gif 2026032002.gif 2026032004.gif 2026032011.gif
/home/griffin/scripts/fli2videoMC.sh SNSW202603.fli 7
22-Mar-2026 05:45:30 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SNSW/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SNSW
rsync took 0.013mins
 
ls /home/vamp1/pub_web/analysis/L3U_pcg//*.gif
No gifs for date range: 01 Mar 2026 - 31 Mar 2026
cat: index.head: No such file or directory
22-Mar-2026 05:45:40 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli L3U_pcg/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/L3U_pcg
rsync took 0.0292mins
 
On the third stroke, it will be 22-Mar-2026 05:45:41
Plotting 4 regions took 0.258h. rsyncing took 0.263mins (0.0658mins/region avg). Thredds retries: 0
\rm /home/vamp1/intranet/cronlogs/DG/psst/202601*.html
\rm /home/vamp1/intranet/cronlogs/DG/psst/202601*.html
1 rm: cannot remove '/home/vamp1/intranet/cronlogs/DG/psst/202601*.html': No such file or directory

finishing at 22-Mar-2026 05:45:42