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                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
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running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :64
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The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
psst_OC starting job nrtsst at 20-Jan-2026 05:30:13 on oc3-hba

usesats =
          2.00          3.00         18.00         19.00         20.00
Looking for data in range:
13-Jan-2026 18:30:13
19-Jan-2026 18:30:13
ans =
  4x18 char array
    'Bris3_   Brisbane2'
    'Bris-Syd Bris-Syd '
    'Coffs    Coffs    '
    'SNSW     SNSW     '
first read
--2026-01-20 05:30:14--  http://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-12-14T18%3A30%3A13+AND+TIME+%3C%3D+2026-01-19T18%3A30%3A13+AND+TEMP_b+%3D+true
Resolving geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)... 13.239.153.134, 52.62.25.177, 52.65.8.15
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|13.239.153.134|:80... connected.
HTTP request sent, awaiting response... 301 Moved Permanently
Location: https://geoserver-123.aodn.org.au:443/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-12-14T18%3A30%3A13+AND+TIME+%3C%3D+2026-01-19T18%3A30%3A13+AND+TEMP_b+%3D+true [following]
--2026-01-20 05:30:14--  https://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&version=2.0.0&request=GetFeature&typeNames=imos:soop_sst_nrt_trajectory_data&outputFormat=csv&cql_filter=TIME+%3E%3D+2025-12-14T18%3A30%3A13+AND+TIME+%3C%3D+2026-01-19T18%3A30%3A13+AND+TEMP_b+%3D+true
Connecting to geoserver-123.aodn.org.au (geoserver-123.aodn.org.au)|13.239.153.134|:443... connected.
HTTP request sent, awaiting response... 200 
Length: unspecified [text/csv]
Saving to: ‘/tmp/tp39a8dbb1_44f9_41bc_acb3_6f18cd772a1d.csv’


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p39a8dbb1_44f9_41bc     [                <=> ]  21.62M  6.66MB/s               
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/tmp/tp39a8dbb1_44f     [               <=>  ]  25.18M  6.65MB/s    in 3.7s    

2026-01-20 05:30:22 (6.73 MB/s) - ‘/tmp/tp39a8dbb1_44f9_41bc_acb3_6f18cd772a1d.csv’ saved [26406884]

FINISHED --2026-01-20 05:30:22--
Total wall clock time: 8.5s
Downloaded: 1 files, 25M in 3.7s (6.73 MB/s)
SOOP dates, sst, lat, lon, latf, lonf
1 14-Dec 19Z - 18-Jan 23Z, 28.4       31.7     -16.93      -6.65      145.7      151.3      -6.65      -6.65      147.9      147.9
2 14-Dec 19Z - 05-Jan 05Z, 27.5       30.6       1.19      14.58      103.7      124.7        NaN        NaN        NaN        NaN
3 14-Dec 23Z - 17-Jan 23Z, 20.28      24.86     -32.01     -31.82      115.5      115.7        -32     -31.83      115.5      115.7
4 14-Dec 19Z - 18-Jan 23Z, 28.1       31.8     -13.37      -9.23      141.5      144.1     -13.37      -9.58      141.5      143.8
5 14-Dec 19Z - 18-Jan 23Z, 15.4       30.3     -39.01      13.05      100.8      153.8     -39.01     -34.82      115.3      144.6
6 14-Dec 18Z - 14-Jan 08Z, 25.76      31.63     -19.26     -11.02      143.2      147.6     -19.26      -18.7      146.8      147.1
7 14-Dec 18Z - 17-Jan 23Z, 26.26      32.43     -23.62     -10.55      142.2      152.2     -23.61     -23.45      151.9      152.2
8 14-Dec 19Z - 18-Jan 23Z, 14.8       21.9     -41.18     -38.08      144.4      146.4     -41.18     -38.09      144.4      146.4
 
reading ACORN data at 20-Jan-2026 05:30:24
                                          
             
ROT _non-QC 1
                                                                                           
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheROT_non-QC2026.mat                          
had 404 records from 01-Jan-2026 00:00:00 to 19-Jan-2026 04:00:00 = 93% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/ROT/2026/catalog.xml'
tcatal =
          2.88
Found 415 in catalog, 415 for _ROT_. 11 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260119T050000Z_ROT_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260119T150000Z_ROT_FV00_1-hour-avg.nc
Reading 10 then estimating time to read them all:
20-Jan-2026 05:30:35 IMOS_ACORN_V_20260119T050000Z_ROT_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheROT_non-QC2026.mat
20-Jan-2026 05:30:40 IMOS_ACORN_V_20260119T060000Z_ROT_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:30:45 IMOS_ACORN_V_20260119T070000Z_ROT_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:30:50 IMOS_ACORN_V_20260119T080000Z_ROT_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:30:55 IMOS_ACORN_V_20260119T090000Z_ROT_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:31:00 IMOS_ACORN_V_20260119T100000Z_ROT_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:31:05 IMOS_ACORN_V_20260119T110000Z_ROT_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:31:10 IMOS_ACORN_V_20260119T120000Z_ROT_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:31:15 IMOS_ACORN_V_20260119T130000Z_ROT_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:31:20 IMOS_ACORN_V_20260119T140000Z_ROT_FV00_1-hour-avg.nc had 1 records
reading 11 files will take about 1min =0h
20-Jan-2026 05:31:26 IMOS_ACORN_V_20260119T150000Z_ROT_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheROT_non-QC2026.mat
Took 1min =0h to read data for 19-Jan-2026 05:00:00 - 19-Jan-2026 15:00:00
                                                                                               
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheROT_non-QC2026.mat                              
now has 415 records from 01-Jan-2026 00:00:00 to 19-Jan-2026 15:00:00 = 93% complete for period
             
SAG _non-QC 1
                                                                                           
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheSAG_non-QC2026.mat                          
had 255 records from 01-Jan-2026 00:30:00 to 17-Jan-2026 15:30:00 = 64% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/SAG/2026/catalog.xml'
tcatal =
          2.14
Found 255 in catalog, 255 for _SAG_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
              
NEWC _non-QC 1
                                                                                           
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat                         
had 229 records from 01-Jan-2026 00:00:00 to 19-Jan-2026 05:00:00 = 52% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/NEWC/2026/catalog.xml'
tcatal =
          1.74
Found 237 in catalog, 237 for _NEWC_. 8 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260119T060000Z_NEWC_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260119T150000Z_NEWC_FV00_1-hour-avg.nc
20-Jan-2026 05:31:37 IMOS_ACORN_V_20260119T060000Z_NEWC_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat
20-Jan-2026 05:31:43 IMOS_ACORN_V_20260119T070000Z_NEWC_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:31:48 IMOS_ACORN_V_20260119T080000Z_NEWC_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:31:52 IMOS_ACORN_V_20260119T090000Z_NEWC_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:31:57 IMOS_ACORN_V_20260119T100000Z_NEWC_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:32:02 IMOS_ACORN_V_20260119T130000Z_NEWC_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:32:07 IMOS_ACORN_V_20260119T140000Z_NEWC_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:32:12 IMOS_ACORN_V_20260119T150000Z_NEWC_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat
Took 1min =0h to read data for 19-Jan-2026 06:00:00 - 19-Jan-2026 15:00:00
                                                                                               
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNEWC_non-QC2026.mat                             
now has 237 records from 01-Jan-2026 00:00:00 to 19-Jan-2026 15:00:00 = 53% complete for period
              
TURQ _non-QC 1
                                                                                           
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat                         
had 369 records from 01-Jan-2026 00:00:00 to 19-Jan-2026 05:00:00 = 84% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/TURQ/2026/catalog.xml'
tcatal =
          2.29
Found 380 in catalog, 380 for _TURQ_. 11 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260119T060000Z_TURQ_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260119T160000Z_TURQ_FV00_1-hour-avg.nc
Reading 10 then estimating time to read them all:
20-Jan-2026 05:32:22 IMOS_ACORN_V_20260119T060000Z_TURQ_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat
20-Jan-2026 05:32:29 IMOS_ACORN_V_20260119T070000Z_TURQ_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:32:34 IMOS_ACORN_V_20260119T080000Z_TURQ_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:32:39 IMOS_ACORN_V_20260119T090000Z_TURQ_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:32:44 IMOS_ACORN_V_20260119T100000Z_TURQ_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:32:49 IMOS_ACORN_V_20260119T110000Z_TURQ_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:32:55 IMOS_ACORN_V_20260119T120000Z_TURQ_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:33:00 IMOS_ACORN_V_20260119T130000Z_TURQ_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:33:05 IMOS_ACORN_V_20260119T140000Z_TURQ_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:33:10 IMOS_ACORN_V_20260119T150000Z_TURQ_FV00_1-hour-avg.nc had 1 records
reading 11 files will take about 1min =0h
20-Jan-2026 05:33:15 IMOS_ACORN_V_20260119T160000Z_TURQ_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat
Took 1min =0h to read data for 19-Jan-2026 06:00:00 - 19-Jan-2026 16:00:00
                                                                                               
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheTURQ_non-QC2026.mat                             
now has 380 records from 01-Jan-2026 00:00:00 to 19-Jan-2026 16:00:00 = 85% complete for period
              
CORL _non-QC 1
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCORL_non-QC2026.mat does not exist
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/CORL/2026/catalog.xml'
list_thredds_folders FAILED
tcatal =
          0.24
Found 0 in catalog, 0 for _CORL_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
             
NWA _non-QC 1
                                                                                           
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat                          
had 269 records from 01-Jan-2026 00:30:00 to 19-Jan-2026 05:30:00 = 62% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/NWA/2026/catalog.xml'
tcatal =
          2.06
Found 273 in catalog, 273 for _NWA_. 4 unread before.
first and last files found in the catalog (that are not already cached) follow. You should check if others are new versions
IMOS_ACORN_V_20260119T063000Z_NWA_FV00_1-hour-avg.nc
IMOS_ACORN_V_20260119T093000Z_NWA_FV00_1-hour-avg.nc
20-Jan-2026 05:33:26 IMOS_ACORN_V_20260119T063000Z_NWA_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat
20-Jan-2026 05:33:31 IMOS_ACORN_V_20260119T073000Z_NWA_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:33:36 IMOS_ACORN_V_20260119T083000Z_NWA_FV00_1-hour-avg.nc had 1 records
20-Jan-2026 05:33:41 IMOS_ACORN_V_20260119T093000Z_NWA_FV00_1-hour-avg.nc had 1 records
saved /home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat
Took 0min =0h to read data for 19-Jan-2026 06:30:00 - 19-Jan-2026 09:30:00
                                                                                               
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheNWA_non-QC2026.mat                              
now has 273 records from 01-Jan-2026 00:30:00 to 19-Jan-2026 09:30:00 = 62% complete for period
             
COF _non-QC 1
                                                                                           
/home/vamp1/varney/gri159/IMOScache/ACORN/cacheCOF_non-QC2026.mat                          
had 282 records from 01-Jan-2026 00:30:00 to 16-Jan-2026 04:30:00 = 77% complete for period
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ACORN/gridded_1h-avg-current-map_non-QC/COF/2026/catalog.xml'
tcatal =
          1.79
Found 282 in catalog, 282 for _COF_. 0 unread before.
none of the files found in the catalog are not already cached (but you should check if they are new versions)
Finished reading ACORN data at 20-Jan-2026 05:33:43
                                                   
reading 7 drifter files
interpolating 3 drifters
getting nrt Argo
Found 172 profiles
                                                                                       
loaded Argo data for 172 profiles, spanning 08-Jan-2026 21:47:15 - 19-Jan-2026 03:48:26
                                                                                       
Reading 142 MNF files and binning at 15-min intervals
Found 0 ship data points in lat, lon range-64  -63  150  153 from 13-Jan-2026 19:08:30 to 19-Jan-2026 16:53:30
count, min, max, median SST: 568   -1    1    0
glf =
    'nrt_all_v8'
gltypes =
  1x2 cell array
    {'seaglider'}    {'slocum_glider'}
update from thredds?: 1
loaded data for 61 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/nrt_all_v8. Last10:
PortLincoln20250529  57 17-Jun-2025 10:33:31 
TwoRocks20250515     1 24-May-2025 05:37:11 
Portland20250522     1 22-May-2025 18:35:29 
Forster20250507      75 02-Jun-2025 18:38:13 
BassStrait20250501   52 19-May-2025 10:34:34 
Ningaloo20250402     42 16-Apr-2025 10:34:59 
Esperance20250327    41 10-Apr-2025 10:34:16 
Portland20250312     60 02-Apr-2025 10:34:46 
Onslow20250225       66 19-Mar-2025 18:34:16 
Forster20250225      36 09-Mar-2025 18:34:05 
TwoRocks20250219     91 15-Mar-2025 18:34:56 
  folder       nfol datespan   nnow reading
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/seaglider/catalog.xml'
list_thredds_folders FAILED
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/slocum_glider/catalog.xml'
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Adelaide20251128/IMOS_ANFOG_BCEOSTUV_20251128T011859Z_SL994_FV00_timeseries_END-20251211T210155Z.nc'}
                                                                              
20-Jan-2026 05:34:43 Found 1 .nc files in IMOS/ANFOG/REALTIME/Adelaide20251128
uncached mission detected:
Adelaide20251128          
                          
not checking for gap-filling files
found 0 uncached .nc files in timerange for Adelaide20251128
Adelaide20251128 1: 28-Nov-2025 - 11-Dec-2025 0:  - 
slocum_glider Adelaide20251128     had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/BassStrait20250501/IMOS_ANFOG_BCEOSTUV_20250501T053639Z_SL212_FV00_timeseries_END-20250518T221720Z.nc'}
                                                                                
20-Jan-2026 05:34:44 Found 1 .nc files in IMOS/ANFOG/REALTIME/BassStrait20250501
BassStrait20250501   had data til 18-May-2025 21:54:48
not checking for gap-filling files
found 0 uncached .nc files in timerange for BassStrait20250501
BassStrait20250501 1: 01-May-2025 - 18-May-2025 0:  - 
had already: 52:  01-May-2025 06:18:27 - 18-May-2025 21:54:48
slocum_glider BassStrait20250501   had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Forster20250507/IMOS_ANFOG_BCEOSTUV_20250506T231155Z_SL248_FV00_timeseries_END-20250601T230011Z.nc'}
                                                                             
20-Jan-2026 05:34:45 Found 1 .nc files in IMOS/ANFOG/REALTIME/Forster20250507
Forster20250507      had data til 01-Jun-2025 22:30:44
not checking for gap-filling files
found 0 uncached .nc files in timerange for Forster20250507
Forster20250507 1: 06-May-2025 - 01-Jun-2025 0:  - 
had already: 75:  06-May-2025 23:22:38 - 01-Jun-2025 22:30:44
slocum_glider Forster20250507      had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20251121/IMOS_ANFOG_BCEOSTUV_20251121T001248Z_SL209_FV00_timeseries_END-20251215T212519Z.nc'}
                                                                                  
20-Jan-2026 05:34:45 Found 1 .nc files in IMOS/ANFOG/REALTIME/MissionBeach20251121
uncached mission detected:
MissionBeach20251121      
                          
not checking for gap-filling files
found 0 uncached .nc files in timerange for MissionBeach20251121
MissionBeach20251121 1: 21-Nov-2025 - 15-Dec-2025 0:  - 
slocum_glider MissionBeach20251121 had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260115/IMOS_ANFOG_BCEOSTUV_20260115T012138Z_SL209_FV00_timeseries_END-20260119T173755Z.nc'}
                                                                                  
20-Jan-2026 05:34:46 Found 1 .nc files in IMOS/ANFOG/REALTIME/MissionBeach20260115
uncached mission detected:
MissionBeach20260115      
                          
not checking for gap-filling files
found 1 uncached .nc files in timerange for MissionBeach20260115
MissionBeach20260115 1: 15-Jan-2026 - 19-Jan-2026 1: 15-Jan-2026 01:21:38 - 19-Jan-2026 17:37:55
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260115/IMOS_ANFOG_BCEOSTUV_20260115T012138Z_SL209_FV00_timeseries_END-20260119T173755Z.nc
max(julall)= 19-Jan-2026 17:37:55
length(julall)= 8855
range(find(cndci>2))= 2  8854
range(find(julall>maxjulj))= 1  8855
2026-01-19T18:06:50Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
8853 8720 134     
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 177.76        191.36        199.27
expected 8853 records with 0>depth<3000 but found only 8513 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260115/IMOS_ANFOG_BCEOSTUV_20260115T012138Z_SL209_FV00_timeseries_END-20260119T173755Z.nc
........
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20241119/IMOS_ANFOG_BCEOSTUV_20241119T012503Z_SL994_FV00_timeseries_END-20241211T000614Z.nc'}
                                                                            
20-Jan-2026 05:35:03 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20241119
Onslow20241119       had data til 10-Dec-2024 23:23:05
not checking for gap-filling files
found 0 uncached .nc files in timerange for Onslow20241119
Onslow20241119 1: 19-Nov-2024 - 11-Dec-2024 0:  - 
had already: 65:  19-Nov-2024 02:01:10 - 10-Dec-2024 23:23:05
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250129/IMOS_ANFOG_BCEOSTUV_20250129T061653Z_SL812_FV00_timeseries_END-20250130T135435Z.nc'}
                                                                            
20-Jan-2026 05:35:03 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20250129
Onslow20250129       had data til 18-May-2025 06:16:25
not checking for gap-filling files
found 0 uncached .nc files in timerange for Onslow20250129
Onslow20250129 1: 29-Jan-2025 - 30-Jan-2025 0:  - 
had already: 30:  29-Jan-2025 06:23:58 - 18-May-2025 06:16:25
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250225/IMOS_ANFOG_BCEOSTUV_20250225T013137Z_SL248_FV00_timeseries_END-20250319T043227Z.nc'}
                                                                            
20-Jan-2026 05:35:04 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20250225
Onslow20250225       had data til 19-Mar-2025 03:58:04
not checking for gap-filling files
found 0 uncached .nc files in timerange for Onslow20250225
Onslow20250225 1: 25-Feb-2025 - 19-Mar-2025 0:  - 
had already: 66:  25-Feb-2025 01:45:11 - 19-Mar-2025 03:58:04
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/PortLincoln20250529/IMOS_ANFOG_BCEOSTUV_20250529T022639Z_SL227_FV00_timeseries_END-20250617T005027Z.nc'}
                                                                                 
20-Jan-2026 05:35:04 Found 1 .nc files in IMOS/ANFOG/REALTIME/PortLincoln20250529
PortLincoln20250529  had data til 16-Jun-2025 23:50:17
gltypes =
  1x2 cell array
    {'seaglider'}    {'slocum_glider'}
update from thredds?: 0
loaded data for 61 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/nrt_all_v8. Last10:
PortLincoln20250529  57 17-Jun-2025 10:33:31 
TwoRocks20250515     1 24-May-2025 05:37:11 
Portland20250522     1 22-May-2025 18:35:29 
Forster20250507      75 02-Jun-2025 18:38:13 
BassStrait20250501   52 19-May-2025 10:34:34 
Ningaloo20250402     42 16-Apr-2025 10:34:59 
Esperance20250327    41 10-Apr-2025 10:34:16 
Portland20250312     60 02-Apr-2025 10:34:46 
Onslow20250225       66 19-Mar-2025 18:34:16 
Forster20250225      36 09-Mar-2025 18:34:05 
TwoRocks20250219     91 15-Mar-2025 18:34:56 
        
summary:
Finished reading nrt_all_v8 ANFOG (glider) data at 20-Jan-2026 05:35:05
                                                                       
                                                             
Doing region 46 Bris3_ (1/4) starting at 20-Jan-2026 05:35:05
Looking for data in range:
ans =
    '13-Jan-2026 18:30:13'
ans =
    '19-Jan-2026 18:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/
Browser URL:  https://mrs-data.csiro.au/thredds/catalog/imos-srs/sst/ghrsst/L3U/catalog.html
ghrsstFS =
    'https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/'
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8 with pcgood for 10-Mar-2019 00:08:59 - 19-Jan-2026 01:52:03
Found 290210 /RT files in the whole indexcache. Fixed 0 filenames with no .gz
changed 0 file extensions from .nc.gz to .nc4
/usr/local/bin/xwget.sh -O 202601200535index.nc -N -t 4 https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3U/index.nc
maxage =
      12436.51
202601200535index.nc has 950496 records, the first and last have date, satnum:
02-Jan-1992 06:21:59 (NOAA11)
29-Dec-2025 21:00:00 (NOAA20)
The earliest and latest SST data are 34yr and 502 h old, for
02-Jan-1992 06:21:59 (NOAA11)
29-Dec-2025 21:00:00 (NOAA20)
sat numbers are: 2   3   9  11  12  14  15  16  17  18  19  20
in last 200 files: 3  20
reading 0 files  will take about 0min =0h at 7s each
not updating /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8. (updateSST=1 length(fi)=0)
/home/vamp1/pub_web/analysis/L3U_pcg/2026012005.tif
\rm 202601200535index.nc
L3U available to 19-Jan-2026 01:52:03(=17h old)
27 cached images are in the time-window, as are 1366 files at thredds. 1 of those have sufficient %good.
seeking earlier data
reading
    'in2023_v06/proc/wh75/contour/wh75'
 
/home/vamp1/sco243/investigator_adcp/in2023_v06/proc/wh75/contour/wh75.nc
Cruise area: 151       158     -38.9     -31.9
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260116, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
04-Jan-2026 12:00:00
05-Jan-2026 12:00:00
16-Jan-2026 12:00:00
haverun =
    'CMRNRT'
region =
        151.75        156.65        -30.45        -25.75
152        0.2      156.4 -30.2        0.2        -26
nav 0
CLNAME - "CARS_latest" version being used by default.
[  This warning once per session only  ]
shipstride =
          3.00
region 46 Bris3_ record 1/25 at 20-Jan-2026 05:35:23LT, image time: 14-Jan-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601140240.mat  15 % good
plotted: VIIRS_NPP 2026011402 15% new good 75% total good
region 46 Bris3_ record 2/25 at 20-Jan-2026 05:35:25LT, image time: 14-Jan-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601140300.mat  21 % good
plotted: VIIRS_N20 2026011403 21% new good 75% total good
region 46 Bris3_ record 3/25 at 20-Jan-2026 05:35:26LT, image time: 14-Jan-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601140420.mat  17 % good
plotted: VIIRS_NPP 2026011404 17% new good 75% total good
region 46 Bris3_ record 4/25 at 20-Jan-2026 05:35:27LT, image time: 14-Jan-2026 10:46:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601141046.mat  32 % good
plotted: NOAA _M 2026011410 32% new good 75% total good
region 46 Bris3_ record 5/25 at 20-Jan-2026 05:35:28LT, image time: 14-Jan-2026 13:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601141350.mat  8 % good
plotted: VIIRS_NPP 2026011413 8% new good 75% total good
region 46 Bris3_ record 6/25 at 20-Jan-2026 05:35:30LT, image time: 14-Jan-2026 14:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601141410.mat  13 % good
plotted: VIIRS_N20 2026011414 13% new good 75% total good
region 46 Bris3_ record 7/25 at 20-Jan-2026 05:35:30LT, image time: 14-Jan-2026 15:30:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601141530.mat  11 % good
plotted: VIIRS_NPP 2026011415 11% new good 75% total good
region 46 Bris3_ record 8/25 at 20-Jan-2026 05:35:31LT, image time: 15-Jan-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601150400.mat  12 % good
plotted: VIIRS_NPP 2026011504 12% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011504.gif
region 46 Bris3_ record 9/25 at 20-Jan-2026 05:35:35LT, image time: 16-Jan-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601160400.mat  27 % good
plotted: VIIRS_N20 2026011604 27% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011604.gif
region 46 Bris3_ record 10/25 at 20-Jan-2026 05:35:38LT, image time: 16-Jan-2026 10:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601161004.mat  23 % good
plotted: NOAA _M 2026011610 23% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011610.gif
region 46 Bris3_ record 11/25 at 20-Jan-2026 05:35:41LT, image time: 16-Jan-2026 11:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601161143.mat  20 % good
plotted: NOAA _M 2026011611 20% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011611.gif
region 46 Bris3_ record 12/25 at 20-Jan-2026 05:35:45LT, image time: 16-Jan-2026 11:46:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601161146.mat  16 % good
plotted: NOAA _M 2026011611 16% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011611.gif
region 46 Bris3_ record 13/25 at 20-Jan-2026 05:35:48LT, image time: 16-Jan-2026 14:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601161450.mat  9 % good
plotted: VIIRS_NPP 2026011614 9% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011614.gif
region 46 Bris3_ record 14/25 at 20-Jan-2026 05:35:51LT, image time: 16-Jan-2026 15:10:00Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                            
region 46 Bris3_ record 15/25 at 20-Jan-2026 05:36:40LT, image time: 17-Jan-2026 03:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601170320.mat  28 % good
plotted: VIIRS_NPP 2026011703 28% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011703.gif
region 46 Bris3_ record 16/25 at 20-Jan-2026 05:36:44LT, image time: 17-Jan-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601170340.mat  25 % good
plotted: VIIRS_N20 2026011703 25% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011703.gif
region 46 Bris3_ record 17/25 at 20-Jan-2026 05:36:47LT, image time: 17-Jan-2026 11:25:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601171125.mat  18 % good
plotted: NOAA _M 2026011711 18% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011711.gif
region 46 Bris3_ record 18/25 at 20-Jan-2026 05:36:50LT, image time: 17-Jan-2026 14:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601171440.mat  22 % good
plotted: VIIRS_NPP 2026011714 22% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011714.gif
region 46 Bris3_ record 19/25 at 20-Jan-2026 05:36:53LT, image time: 17-Jan-2026 15:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601171500.mat  22 % good
plotted: VIIRS_N20 2026011715 22% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011715.gif
region 46 Bris3_ record 20/25 at 20-Jan-2026 05:36:56LT, image time: 17-Jan-2026 22:37:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601172237.mat  9 % good
plotted: NOAA _M 2026011722 9% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011722.gif
region 46 Bris3_ record 21/25 at 20-Jan-2026 05:36:58LT, image time: 17-Jan-2026 22:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601172240.mat  12 % good
plotted: NOAA _M 2026011722 12% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011722.gif
region 46 Bris3_ record 22/25 at 20-Jan-2026 05:37:01LT, image time: 18-Jan-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601180300.mat  12 % good
plotted: VIIRS_NPP 2026011803 12% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011803.gif
region 46 Bris3_ record 23/25 at 20-Jan-2026 05:37:04LT, image time: 18-Jan-2026 11:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601181104.mat  37 % good
plotted: NOAA _M 2026011811 37% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011811.gif
region 46 Bris3_ record 24/25 at 20-Jan-2026 05:37:06LT, image time: 18-Jan-2026 14:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601181420.mat  25 % good
plotted: VIIRS_NPP 2026011814 25% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011814.gif
region 46 Bris3_ record 25/25 at 20-Jan-2026 05:37:09LT, image time: 18-Jan-2026 14:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris3_/202601181440.mat  26 % good
plotted: VIIRS_N20 2026011814 26% new good 75% total good
/home/vamp1/pub_web/analysis/Bris3_/2026011814.gif
ls /home/vamp1/pub_web/analysis/Bris3_//*.gif
mfli =
    'Bris3_202601.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris3_202601.fli 150  2026010203.gif 2026010214.gif 2026010302.gif 2026010303.gif 2026010304.gif 2026010311.gif 2026010314.gif 2026010315.gif 2026010322.gif 2026010402.gif 2026010404.gif 2026010415.gif 2026010510.gif 2026010515.gif 2026010521.gif 2026010603.gif 2026010610.gif 2026010611.gif 2026010614.gif 2026010703.gif 2026010711.gif 2026010714.gif 2026010904.gif 2026010913.gif 2026010915.gif 2026011002.gif 2026011003.gif 2026011004.gif 2026011010.gif 2026011015.gif 2026011021.gif 2026011311.gif 2026011314.gif 2026011402.gif 2026011403.gif 2026011404.gif 2026011410.gif 2026011413.gif 2026011414.gif 2026011415.gif 2026011504.gif 2026011604.gif 2026011610.gif 2026011611.gif 2026011614.gif 2026011703.gif 2026011711.gif 2026011714.gif 2026011715.gif 2026011722.gif 2026011803.gif 2026011811.gif 2026011814.gif
/home/griffin/scripts/fli2videoMC.sh Bris3_202601.fli 7
20-Jan-2026 05:37:19 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris3_/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris3_
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/Bris3_/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/Bris3_
rsync took 0.0962mins
 
filesmissing =
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc'
there were 1 missing files so I will re-index the server for the next region
                                                               
Doing region 39 Bris-Syd (2/4) starting at 20-Jan-2026 05:37:25
Looking for data in range:
ans =
    '13-Jan-2026 18:30:13'
ans =
    '19-Jan-2026 18:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/
Browser URL:  https://mrs-data.csiro.au/thredds/catalog/imos-srs/sst/ghrsst/L3U/catalog.html
ghrsstFS =
    'https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/'
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8 with pcgood for 10-Mar-2019 00:08:59 - 19-Jan-2026 01:52:03
Found 290210 /RT files in the whole indexcache. Fixed 0 filenames with no .gz
changed 0 file extensions from .nc.gz to .nc4
/usr/local/bin/xwget.sh -O 202601200537index.nc -N -t 4 https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3U/index.nc
maxage =
      12436.51
202601200537index.nc has 950496 records, the first and last have date, satnum:
02-Jan-1992 06:21:59 (NOAA11)
29-Dec-2025 21:00:00 (NOAA20)
The earliest and latest SST data are 34yr and 502 h old, for
02-Jan-1992 06:21:59 (NOAA11)
29-Dec-2025 21:00:00 (NOAA20)
sat numbers are: 2   3   9  11  12  14  15  16  17  18  19  20
in last 200 files: 3  20
reading 0 files  will take about 0min =0h at 7s each
not updating /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8. (updateSST=1 length(fi)=0)
\rm 202601200537index.nc
L3U available to 19-Jan-2026 01:52:03(=17h old)
33 cached images are in the time-window, as are 1366 files at thredds. 0 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260116, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
04-Jan-2026 12:00:00
05-Jan-2026 12:00:00
16-Jan-2026 12:00:00
haverun =
    'CMRNRT'
region =
        149.95        158.25        -35.05        -26.35
150.2        0.2        158 -34.8        0.2      -26.6
nav 0
shipstride =
          4.00
region 39 Bris-Syd record 1/24 at 20-Jan-2026 05:37:39LT, image time: 13-Jan-2026 22:22:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601132222.mat  21 % good
plotted: NOAA _M 2026011322 21% new good 69% total good
region 39 Bris-Syd record 2/24 at 20-Jan-2026 05:37:42LT, image time: 14-Jan-2026 02:30:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601140230.mat  11 % good
plotted: VIIRS_NPP 2026011402 11% new good 69% total good
region 39 Bris-Syd record 3/24 at 20-Jan-2026 05:37:44LT, image time: 14-Jan-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601140240.mat  8 % good
plotted: VIIRS_NPP 2026011402 8% new good 69% total good
region 39 Bris-Syd record 4/24 at 20-Jan-2026 05:37:47LT, image time: 14-Jan-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601140300.mat  25 % good
plotted: VIIRS_N20 2026011403 25% new good 69% total good
region 39 Bris-Syd record 5/24 at 20-Jan-2026 05:37:49LT, image time: 14-Jan-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601140420.mat  13 % good
plotted: VIIRS_NPP 2026011404 13% new good 69% total good
region 39 Bris-Syd record 6/24 at 20-Jan-2026 05:37:52LT, image time: 14-Jan-2026 10:46:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601141046.mat  12 % good
plotted: NOAA _M 2026011410 12% new good 69% total good
region 39 Bris-Syd record 7/24 at 20-Jan-2026 05:37:54LT, image time: 15-Jan-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601150400.mat  11 % good
plotted: VIIRS_NPP 2026011504 11% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011504.gif
region 39 Bris-Syd record 8/24 at 20-Jan-2026 05:38:08LT, image time: 15-Jan-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601150420.mat  8 % good
plotted: VIIRS_N20 2026011504 8% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011504.gif
region 39 Bris-Syd record 9/24 at 20-Jan-2026 05:38:21LT, image time: 15-Jan-2026 23:22:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601152322.mat  6 % good
plotted: NOAA _M 2026011523 6% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011523.gif
region 39 Bris-Syd record 10/24 at 20-Jan-2026 05:38:28LT, image time: 16-Jan-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601160400.mat  11 % good
plotted: VIIRS_N20 2026011604 11% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011604.gif
region 39 Bris-Syd record 11/24 at 20-Jan-2026 05:38:34LT, image time: 16-Jan-2026 10:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601161004.mat  8 % good
plotted: NOAA _M 2026011610 8% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011610.gif
region 39 Bris-Syd record 12/24 at 20-Jan-2026 05:38:40LT, image time: 16-Jan-2026 11:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601161143.mat  18 % good
plotted: NOAA _M 2026011611 18% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011611.gif
region 39 Bris-Syd record 13/24 at 20-Jan-2026 05:38:46LT, image time: 16-Jan-2026 13:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601161340.mat  9 % good
plotted: VIIRS_N20 2026011613 9% new good 69% total good
the array is entirely composed of NaNs
the array is entirely composed of NaNs
/home/vamp1/pub_web/analysis/Bris-Syd/2026011613.gif
region 39 Bris-Syd record 14/24 at 20-Jan-2026 05:38:52LT, image time: 16-Jan-2026 14:50:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601161450.mat  5 % good
plotted: VIIRS_NPP 2026011614 5% new good 69% total good
the array is entirely composed of NaNs
the array is entirely composed of NaNs
/home/vamp1/pub_web/analysis/Bris-Syd/2026011614.gif
region 39 Bris-Syd record 15/24 at 20-Jan-2026 05:38:59LT, image time: 16-Jan-2026 15:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601161500.mat  9 % good
plotted: VIIRS_NPP 2026011615 9% new good 69% total good
the array is entirely composed of NaNs
the array is entirely composed of NaNs
/home/vamp1/pub_web/analysis/Bris-Syd/2026011615.gif
region 39 Bris-Syd record 16/24 at 20-Jan-2026 05:39:06LT, image time: 17-Jan-2026 03:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601170320.mat  13 % good
plotted: VIIRS_NPP 2026011703 13% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011703.gif
region 39 Bris-Syd record 17/24 at 20-Jan-2026 05:39:13LT, image time: 17-Jan-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601170340.mat  13 % good
plotted: VIIRS_N20 2026011703 13% new good 69% total good
the array is entirely composed of NaNs
the array is entirely composed of NaNs
/home/vamp1/pub_web/analysis/Bris-Syd/2026011703.gif
region 39 Bris-Syd record 18/24 at 20-Jan-2026 05:39:19LT, image time: 17-Jan-2026 11:25:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601171125.mat  5 % good
plotted: NOAA _M 2026011711 5% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011711.gif
region 39 Bris-Syd record 19/24 at 20-Jan-2026 05:39:25LT, image time: 17-Jan-2026 14:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601171440.mat  6 % good
plotted: VIIRS_NPP 2026011714 6% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011714.gif
region 39 Bris-Syd record 20/24 at 20-Jan-2026 05:39:30LT, image time: 17-Jan-2026 15:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601171500.mat  5 % good
plotted: VIIRS_N20 2026011715 5% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011715.gif
region 39 Bris-Syd record 21/24 at 20-Jan-2026 05:39:34LT, image time: 18-Jan-2026 11:01:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601181101.mat  8 % good
plotted: NOAA _M 2026011811 8% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011811.gif
region 39 Bris-Syd record 22/24 at 20-Jan-2026 05:39:40LT, image time: 18-Jan-2026 11:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601181104.mat  11 % good
plotted: NOAA _M 2026011811 11% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011811.gif
region 39 Bris-Syd record 23/24 at 20-Jan-2026 05:39:46LT, image time: 18-Jan-2026 14:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601181420.mat  14 % good
plotted: VIIRS_NPP 2026011814 14% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011814.gif
region 39 Bris-Syd record 24/24 at 20-Jan-2026 05:39:52LT, image time: 18-Jan-2026 14:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Bris-Syd/202601181440.mat  16 % good
plotted: VIIRS_N20 2026011814 16% new good 69% total good
/home/vamp1/pub_web/analysis/Bris-Syd/2026011814.gif
ls /home/vamp1/pub_web/analysis/Bris-Syd//*.gif
mfli =
    'Bris-Syd202601.fli'
/home/griffin/scripts/gifs2fliMC89.sh Bris-Syd202601.fli 150  2026010203.gif 2026010211.gif 2026010214.gif 2026010302.gif 2026010303.gif 2026010304.gif 2026010311.gif 2026010314.gif 2026010315.gif 2026010322.gif 2026010402.gif 2026010404.gif 2026010415.gif 2026010503.gif 2026010504.gif 2026010510.gif 2026010513.gif 2026010515.gif 2026010521.gif 2026010603.gif 2026010610.gif 2026010611.gif 2026010613.gif 2026010614.gif 2026010703.gif 2026010704.gif 2026010711.gif 2026010714.gif 2026010904.gif 2026010913.gif 2026010915.gif 2026011002.gif 2026011003.gif 2026011004.gif 2026011010.gif 2026011012.gif 2026011013.gif 2026011015.gif 2026011021.gif 2026011102.gif 2026011103.gif 2026011203.gif 2026011214.gif 2026011222.gif 2026011302.gif 2026011303.gif 2026011304.gif 2026011311.gif 2026011314.gif 2026011315.gif 2026011322.gif 2026011402.gif 2026011403.gif 2026011404.gif 2026011410.gif 2026011504.gif 2026011523.gif 2026011604.gif 2026011610.gif 2026011611.gif 2026011613.gif 2026011614.gif 2026011615.gif 2026011703.gif 2026011711.gif 2026011714.gif 2026011715.gif 2026011811.gif 2026011814.gif
/home/griffin/scripts/fli2videoMC.sh Bris-Syd202601.fli 7
20-Jan-2026 05:40:09 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Bris-Syd/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Bris-Syd
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/Bris-Syd/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/Bris-Syd
rsync took 0.165mins
 
                                                            
Doing region 25 Coffs (3/4) starting at 20-Jan-2026 05:40:19
Looking for data in range:
ans =
    '13-Jan-2026 18:30:13'
ans =
    '19-Jan-2026 18:30:13'
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/
L3U available to 19-Jan-2026 01:52:03(=17h old)
28 cached images are in the time-window, as are 1366 files at thredds. 1 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260116, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
04-Jan-2026 12:00:00
05-Jan-2026 12:00:00
16-Jan-2026 12:00:00
haverun =
    'CMRNRT'
region =
        152.15        155.45        -32.05        -28.95
152.4        0.2      155.2 -31.8        0.2      -29.2
nav 0
shipstride =
          2.00
region 25 Coffs record 1/21 at 20-Jan-2026 05:40:26LT, image time: 13-Jan-2026 22:22:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601132222.mat  44 % good
plotted: NOAA _M 2026011322 44% new good 99% total good
region 25 Coffs record 2/21 at 20-Jan-2026 05:40:27LT, image time: 14-Jan-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601140240.mat  31 % good
plotted: VIIRS_NPP 2026011402 31% new good 99% total good
region 25 Coffs record 3/21 at 20-Jan-2026 05:40:28LT, image time: 14-Jan-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601140300.mat  41 % good
plotted: VIIRS_N20 2026011403 41% new good 99% total good
region 25 Coffs record 4/21 at 20-Jan-2026 05:40:29LT, image time: 14-Jan-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601140420.mat  36 % good
plotted: VIIRS_NPP 2026011404 36% new good 99% total good
region 25 Coffs record 5/21 at 20-Jan-2026 05:40:30LT, image time: 14-Jan-2026 10:46:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601141046.mat  49 % good
plotted: NOAA _M 2026011410 49% new good 99% total good
region 25 Coffs record 6/21 at 20-Jan-2026 05:40:31LT, image time: 14-Jan-2026 14:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601141410.mat  8 % good
plotted: VIIRS_N20 2026011414 8% new good 99% total good
region 25 Coffs record 7/21 at 20-Jan-2026 05:40:32LT, image time: 15-Jan-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601150400.mat  25 % good
plotted: VIIRS_NPP 2026011504 25% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011504.gif
region 25 Coffs record 8/21 at 20-Jan-2026 05:40:34LT, image time: 15-Jan-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601150420.mat  23 % good
plotted: VIIRS_N20 2026011504 23% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011504.gif
region 25 Coffs record 9/21 at 20-Jan-2026 05:40:36LT, image time: 15-Jan-2026 21:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601152140.mat  28 % good
plotted: NOAA _M 2026011521 28% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011521.gif
region 25 Coffs record 10/21 at 20-Jan-2026 05:40:38LT, image time: 15-Jan-2026 23:22:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601152322.mat  31 % good
plotted: NOAA _M 2026011523 31% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011523.gif
region 25 Coffs record 11/21 at 20-Jan-2026 05:40:40LT, image time: 16-Jan-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601160340.mat  29 % good
plotted: VIIRS_NPP 2026011603 29% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011603.gif
region 25 Coffs record 12/21 at 20-Jan-2026 05:40:42LT, image time: 16-Jan-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601160400.mat  17 % good
plotted: VIIRS_N20 2026011604 17% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011604.gif
region 25 Coffs record 13/21 at 20-Jan-2026 05:40:44LT, image time: 16-Jan-2026 10:04:03Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                              
region 25 Coffs record 14/21 at 20-Jan-2026 05:41:33LT, image time: 16-Jan-2026 11:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601161143.mat  23 % good
plotted: NOAA _M 2026011611 23% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011611.gif
region 25 Coffs record 15/21 at 20-Jan-2026 05:41:35LT, image time: 16-Jan-2026 23:01:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601162301.mat  61 % good
plotted: NOAA _M 2026011623 61% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011623.gif
region 25 Coffs record 16/21 at 20-Jan-2026 05:41:37LT, image time: 17-Jan-2026 03:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601170320.mat  34 % good
plotted: VIIRS_NPP 2026011703 34% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011703.gif
region 25 Coffs record 17/21 at 20-Jan-2026 05:41:38LT, image time: 17-Jan-2026 03:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601170340.mat  28 % good
plotted: VIIRS_N20 2026011703 28% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011703.gif
region 25 Coffs record 18/21 at 20-Jan-2026 05:41:40LT, image time: 17-Jan-2026 11:22:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601171122.mat  32 % good
plotted: NOAA _M 2026011711 32% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011711.gif
region 25 Coffs record 19/21 at 20-Jan-2026 05:41:42LT, image time: 18-Jan-2026 11:04:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601181104.mat  16 % good
plotted: NOAA _M 2026011811 16% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011811.gif
region 25 Coffs record 20/21 at 20-Jan-2026 05:41:44LT, image time: 18-Jan-2026 14:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601181420.mat  19 % good
plotted: VIIRS_NPP 2026011814 19% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011814.gif
region 25 Coffs record 21/21 at 20-Jan-2026 05:41:46LT, image time: 18-Jan-2026 14:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/Coffs/202601181440.mat  25 % good
plotted: VIIRS_N20 2026011814 25% new good 99% total good
/home/vamp1/pub_web/analysis/Coffs/2026011814.gif
ls /home/vamp1/pub_web/analysis/Coffs//*.gif
mfli =
    'Coffs202601.fli'
/home/griffin/scripts/gifs2fliMC89.sh Coffs202601.fli 150  2026010302.gif 2026010303.gif 2026010304.gif 2026010311.gif 2026010314.gif 2026010404.gif 2026010503.gif 2026010504.gif 2026010510.gif 2026010513.gif 2026010515.gif 2026010521.gif 2026010603.gif 2026010610.gif 2026010611.gif 2026010614.gif 2026010703.gif 2026010711.gif 2026010714.gif 2026010904.gif 2026010913.gif 2026010915.gif 2026011002.gif 2026011003.gif 2026011004.gif 2026011010.gif 2026011013.gif 2026011015.gif 2026011021.gif 2026011023.gif 2026011103.gif 2026011203.gif 2026011211.gif 2026011214.gif 2026011222.gif 2026011302.gif 2026011303.gif 2026011304.gif 2026011311.gif 2026011314.gif 2026011315.gif 2026011322.gif 2026011402.gif 2026011403.gif 2026011404.gif 2026011410.gif 2026011414.gif 2026011504.gif 2026011521.gif 2026011523.gif 2026011603.gif 2026011604.gif 2026011611.gif 2026011623.gif 2026011703.gif 2026011711.gif 2026011811.gif 2026011814.gif
/home/griffin/scripts/fli2videoMC.sh Coffs202601.fli 7
20-Jan-2026 05:41:57 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli Coffs/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/Coffs
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/Coffs/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/Coffs
rsync took 0.0616mins
 
filesmissing =
  2x144 char array
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc  '
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc'
there were 1 missing files so I will re-index the server for the next region
                                                          
Doing region 2 SNSW (4/4) starting at 20-Jan-2026 05:42:01
Looking for data in range:
ans =
    '13-Jan-2026 18:30:13'
ans =
    '19-Jan-2026 18:30:13'
looking for AATAMS tag data:
wanted 01-Jan-2026 - 01-Jan-2027, scanning 2026
no tags found
indexing /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/
Browser URL:  https://mrs-data.csiro.au/thredds/catalog/imos-srs/sst/ghrsst/L3U/catalog.html
ghrsstFS =
    'https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/'
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8 with pcgood for 10-Mar-2019 00:08:59 - 19-Jan-2026 01:52:03
Found 290210 /RT files in the whole indexcache. Fixed 0 filenames with no .gz
changed 0 file extensions from .nc.gz to .nc4
/usr/local/bin/xwget.sh -O 202601200542index.nc -N -t 4 https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3U/index.nc
maxage =
      12436.51
202601200542index.nc has 950496 records, the first and last have date, satnum:
02-Jan-1992 06:21:59 (NOAA11)
29-Dec-2025 21:00:00 (NOAA20)
The earliest and latest SST data are 34yr and 502 h old, for
02-Jan-1992 06:21:59 (NOAA11)
29-Dec-2025 21:00:00 (NOAA20)
sat numbers are: 2   3   9  11  12  14  15  16  17  18  19  20
in last 200 files: 3  20
reading 0 files  will take about 0min =0h at 7s each
not updating /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/indexcache_v8. (updateSST=1 length(fi)=0)
\rm 202601200542index.nc
L3U available to 19-Jan-2026 01:52:03(=17h old)
23 cached images are in the time-window, as are 1366 files at thredds. 2 of those have sufficient %good.
dorun =
    'CMRNRT'
/home/datalib/observations/rs/altimetry/gridded/GSLA/NRT00/ has: 20110901 - 20260116, -60...10, 57...185
get_USNRT is reading GSLA
get_USNRT finished reading GSLA
get_USNRT is reading GSL
get_USNRT finished reading GSL
04-Jan-2026 12:00:00
05-Jan-2026 12:00:00
16-Jan-2026 12:00:00
haverun =
    'CMRNRT'
region =
        148.75        156.25        -38.05        -30.95
149        0.2        156 -37.8        0.2      -31.2
nav 0
shipstride =
          4.00
region 2 SNSW record 1/17 at 20-Jan-2026 05:42:18LT, image time: 13-Jan-2026 22:22:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601132222.mat  62 % good
plotted: NOAA _M 2026011322 62% new good 97% total good
region 2 SNSW record 2/17 at 20-Jan-2026 05:42:20LT, image time: 14-Jan-2026 02:30:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601140230.mat  30 % good
plotted: VIIRS_NPP 2026011402 30% new good 97% total good
region 2 SNSW record 3/17 at 20-Jan-2026 05:42:22LT, image time: 14-Jan-2026 04:10:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601140410.mat  16 % good
plotted: VIIRS_NPP 2026011404 16% new good 97% total good
region 2 SNSW record 4/17 at 20-Jan-2026 05:42:23LT, image time: 14-Jan-2026 04:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601140420.mat  18 % good
plotted: VIIRS_NPP 2026011404 18% new good 97% total good
region 2 SNSW record 5/17 at 20-Jan-2026 05:42:25LT, image time: 14-Jan-2026 04:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601140440.mat  20 % good
plotted: VIIRS_N20 2026011404 20% new good 97% total good
region 2 SNSW record 6/17 at 20-Jan-2026 05:42:27LT, image time: 14-Jan-2026 22:01:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601142201.mat  9 % good
plotted: NOAA _M 2026011422 9% new good 97% total good
/home/vamp1/pub_web/analysis/SNSW/2026011422.gif
region 2 SNSW record 7/17 at 20-Jan-2026 05:42:33LT, image time: 15-Jan-2026 02:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601150240.mat  5 % good
plotted: VIIRS_N20 2026011502 5% new good 97% total good
/home/vamp1/pub_web/analysis/SNSW/2026011502.gif
region 2 SNSW record 8/17 at 20-Jan-2026 05:42:41LT, image time: 15-Jan-2026 04:00:00Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260115040000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260115040000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260115040000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260115040000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260115040000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260115040000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260115040000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                            
region 2 SNSW record 9/17 at 20-Jan-2026 05:43:30LT, image time: 15-Jan-2026 04:20:00Z
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260115042000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc
Retry 1: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260115042000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 2: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260115042000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 3: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260115042000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
Retry 4: https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260115042000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc var:lon
could not read https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260115042000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc
skipping https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260115042000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc because its vanished
                                                                                                                                                                            
region 2 SNSW record 10/17 at 20-Jan-2026 05:44:19LT, image time: 16-Jan-2026 04:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601160400.mat  8 % good
plotted: VIIRS_N20 2026011604 8% new good 97% total good
/home/vamp1/pub_web/analysis/SNSW/2026011604.gif
region 2 SNSW record 11/17 at 20-Jan-2026 05:44:25LT, image time: 16-Jan-2026 11:43:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601161143.mat  20 % good
plotted: NOAA _M 2026011611 20% new good 97% total good
/home/vamp1/pub_web/analysis/SNSW/2026011611.gif
region 2 SNSW record 12/17 at 20-Jan-2026 05:44:29LT, image time: 16-Jan-2026 15:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601161500.mat  18 % good
plotted: VIIRS_NPP 2026011615 18% new good 97% total good
the array is entirely composed of NaNs
the array is entirely composed of NaNs
/home/vamp1/pub_web/analysis/SNSW/2026011615.gif
region 2 SNSW record 13/17 at 20-Jan-2026 05:44:33LT, image time: 16-Jan-2026 15:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601161520.mat  14 % good
plotted: VIIRS_N20 2026011615 14% new good 97% total good
the array is entirely composed of NaNs
the array is entirely composed of NaNs
/home/vamp1/pub_web/analysis/SNSW/2026011615.gif
region 2 SNSW record 14/17 at 20-Jan-2026 05:44:37LT, image time: 18-Jan-2026 03:00:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601180300.mat  2 % good
plotted: VIIRS_NPP 2026011803 2% new good 97% total good
/home/vamp1/pub_web/analysis/SNSW/2026011803.gif
region 2 SNSW record 15/17 at 20-Jan-2026 05:44:41LT, image time: 18-Jan-2026 11:01:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601181101.mat  15 % good
plotted: NOAA _M 2026011811 15% new good 97% total good
/home/vamp1/pub_web/analysis/SNSW/2026011811.gif
region 2 SNSW record 16/17 at 20-Jan-2026 05:44:45LT, image time: 18-Jan-2026 14:20:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601181420.mat  8 % good
plotted: VIIRS_NPP 2026011814 8% new good 97% total good
/home/vamp1/pub_web/analysis/SNSW/2026011814.gif
region 2 SNSW record 17/17 at 20-Jan-2026 05:44:49LT, image time: 18-Jan-2026 14:40:00Z
loaded /home/vamp1/varney/gri159/IMOScache/GHRSST/L3U/SNSW/202601181440.mat  11 % good
plotted: VIIRS_N20 2026011814 11% new good 97% total good
/home/vamp1/pub_web/analysis/SNSW/2026011814.gif
ls /home/vamp1/pub_web/analysis/SNSW//*.gif
mfli =
    'SNSW202601.fli'
/home/griffin/scripts/gifs2fliMC89.sh SNSW202601.fli 150  2026010203.gif 2026010204.gif 2026010211.gif 2026010214.gif 2026010302.gif 2026010303.gif 2026010304.gif 2026010402.gif 2026010404.gif 2026010415.gif 2026010502.gif 2026010503.gif 2026010504.gif 2026010512.gif 2026010513.gif 2026010515.gif 2026010521.gif 2026010603.gif 2026010610.gif 2026010611.gif 2026010614.gif 2026010615.gif 2026010703.gif 2026010704.gif 2026010711.gif 2026010714.gif 2026010904.gif 2026010913.gif 2026010915.gif 2026011002.gif 2026011003.gif 2026011004.gif 2026011010.gif 2026011012.gif 2026011013.gif 2026011015.gif 2026011111.gif 2026011203.gif 2026011214.gif 2026011222.gif 2026011302.gif 2026011303.gif 2026011304.gif 2026011311.gif 2026011314.gif 2026011315.gif 2026011322.gif 2026011402.gif 2026011404.gif 2026011422.gif 2026011502.gif 2026011604.gif 2026011611.gif 2026011615.gif 2026011803.gif 2026011811.gif 2026011814.gif
/home/griffin/scripts/fli2videoMC.sh SNSW202601.fli 7
20-Jan-2026 05:45:03 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SNSW/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SNSW
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/SNSW/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/SNSW
rsync took 0.079mins
 
filesmissing =
  4x144 char array
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260116151000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc  '
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/moB/2026/20260116100403-ABOM-L3U_GHRSST-SSTskin-AVHRR_MetOpB-Pol-v02.0-fv01.0.nc'
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/snpp/2026/20260115040000-ABOM-L3U_GHRSST-SSTskin-VIIRS_NPP-Pol-v02.0-fv01.0.nc  '
    'https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3U/n20v/2026/20260115042000-ABOM-L3U_GHRSST-SSTskin-VIIRS_N20-Pol-v02.0-fv01.0.nc  '
there were 2 missing files so I will re-index the server for the next region
ls /home/vamp1/pub_web/analysis/L3U_pcg//*.gif
No gifs for date range: 01 Jan 2026 - 31 Jan 2026
cat: index.head: No such file or directory
20-Jan-2026 05:45:19 rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli L3U_pcg/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/L3U_pcg
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/L3U_pcg/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/L3U_pcg
rsync -lptgoDdv --password-file=$PWFILE --delete --timeout=480 --exclude=\*.fli SnapshotSST/TAGS/L3U_pcg/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/SnapshotSST/TAGS/L3U_pcg
23 building file list ... 
rsync: [sender] change_dir "/home/vamp1/pub_web/analysis/SnapshotSST/TAGS/L3U_pcg" failed: No such file or directory (2)
done

sent 35 bytes  received 20 bytes  36.67 bytes/sec
total size is 0  speedup is 0.00
rsync error: some files/attrs were not transferred (see previous errors) (code 23) at main.c(1338) [sender=3.2.7]

rsync took 0.0342mins
 
On the third stroke, it will be 20-Jan-2026 05:45:21
Plotting 4 regions took 0.252h. rsyncing took 0.436mins (0.109mins/region avg). Thredds retries: 0
\rm /home/vamp1/intranet/cronlogs/DG/psst/202511*.html
\rm /home/vamp1/intranet/cronlogs/DG/psst/202511*.html
1 rm: cannot remove '/home/vamp1/intranet/cronlogs/DG/psst/202511*.html': No such file or directory

finishing at 20-Jan-2026 05:45:21