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                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
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running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :59
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The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
jf =
          2.00
pANFOG starting job nrt at 17-Jul-2026 12:20:13 on oc3-hba

ans =
    'sl2026_v1     '
doing 01-Jan-2025 00:00:00 to 31-Dec-2026 00:00:00 so finishing about 25-Jul-2026 12:04:27
gltypes =
  1x1 cell array
    {'slocum_glider'}
update from thredds?: 1
loaded data for 2 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/sl2026_v1. Last10:
Portland20250522  1 16-Jul-2026 15:48:02 
Esperance20260526 1 16-Jul-2026 15:47:46 
  folder       nfol datespan   nnow reading
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/slocum_glider/catalog.xml'
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Esperance20260526/IMOS_ANFOG_BCEOSTUV_20260526T041612Z_SL248_FV00_timeseries_END-20260623T235057Z.nc'}
                                                                               
17-Jul-2026 12:21:25 Found 1 .nc files in IMOS/ANFOG/REALTIME/Esperance20260526
Esperance20260526 had data til 23-Jun-2026 23:44:34
not checking for gap-filling files
found 0 uncached .nc files in timerange for Esperance20260526
Esperance20260526 1: 26-May-2026 - 23-Jun-2026 0:  - 
had already: 1:  26-May-2026 04:29:00 - 23-Jun-2026 23:44:34
slocum_glider Esperance20260526 had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Portland20250522/IMOS_ANFOG_BCEOSTUV_20250522T014642Z_SL287_FV00_timeseries_END-20250522T025759Z.nc'}
                                                                              
17-Jul-2026 12:21:26 Found 1 .nc files in IMOS/ANFOG/REALTIME/Portland20250522
Portland20250522  had data til 22-May-2025 02:57:59
not checking for gap-filling files
found 0 uncached .nc files in timerange for Portland20250522
Portland20250522 1: 22-May-2025 - 22-May-2025 0:  - 
had already: 1:  22-May-2025 01:59:59 - 22-May-2025 02:57:59
slocum_glider Portland20250522  had no new data in the time period
        
summary:
cqOK=No_QC_performedGood_dataProbably_good_dataBad_data_that_are_potentially_correctableBad_dataValue_changedNot_used
ln -s -f /home/vamp1/varney/gri159/IMOScache/ANFOG/sl2026_v1.mat /home/vamp1/varney/gri159/IMOScache/ANFOG/latest_nrt_sl.mat
calculating glider velocities
Esperance20260526 travelled 538 km
Portland20250522  travelled 1 km
saving glider velocities
                                         
Esperance20260526 1084 surfacings to 30m.
                                      
Portland20250522  2 surfacings to 30m.
saving /home/vamp1/varney/gri159/IMOScache/ANFOG/sl2026_v1_c.mat
getting CARS
got it
        
Yearmaps
Portland20250522  has 95 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_temp_nrt.gif
Esperance20260526 has 122964 data points in 2026
/home/vamp1/pub_web/analysis/gliders/yearmaps/2026_sl_temp_nrt.gif
Portland20250522  has 95 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_tempa_nrt.gif
Esperance20260526 has 122964 data points in 2026
/home/vamp1/pub_web/analysis/gliders/yearmaps/2026_sl_tempa_nrt.gif
Portland20250522  has 95 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_psal_nrt.gif
Esperance20260526 has 122964 data points in 2026
/home/vamp1/pub_web/analysis/gliders/yearmaps/2026_sl_psal_nrt.gif
Portland20250522  has 95 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_psala_nrt.gif
Esperance20260526 has 122964 data points in 2026
/home/vamp1/pub_web/analysis/gliders/yearmaps/2026_sl_psala_nrt.gif
Portland20250522  has 95 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_flu2_nrt.gif
Esperance20260526 has 122964 data points in 2026
/home/vamp1/pub_web/analysis/gliders/yearmaps/2026_sl_flu2_nrt.gif
Portland20250522  has 95 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_doxy_nrt.gif
Esperance20260526 has 122964 data points in 2026
/home/vamp1/pub_web/analysis/gliders/yearmaps/2026_sl_doxy_nrt.gif
                 
Mission T/S plots
/home/vamp1/pub_web/analysis/gliders/missionTS/sl_Esperance20260526_nrt.gif
/home/vamp1/pub_web/analysis/gliders/missionTS/sl_Portland20250522_nrt.gif
                             
Mission map and section plots
                                                       
Esperance20260526 1084 surfacings to 30m. Getting CARS:
got CARS profs
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062400.gif
doing trajectories
took 0.023 mins, sum=0.023
parea3 =
        120.73        123.41        -35.10        -33.12
/home/vamp1/pub_web/analysis/gliders/navEsperance20260526_nrt_30d/2026062400.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062312.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062300.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062212.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062200.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062112.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062100.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062012.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026062000.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061912.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061900.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061812.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061800.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061712.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061700.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061612.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061600.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061512.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061500.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061412.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/2026061400.gif
alltiftogif
alltiftogif
1 tiftogif_1map: No match.

ls /home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_30d/*.gif
mfli =
    'Esperance20260526_nrt_30d.fli'
/home/griffin/scripts/gifs2fliMC89.sh Esperance20260526_nrt_30d.fli 250  2026052612.gif 2026052700.gif 2026052712.gif 2026052800.gif 2026052812.gif 2026052900.gif 2026052912.gif 2026053000.gif 2026053012.gif 2026053100.gif 2026053112.gif 2026060100.gif 2026060112.gif 2026060200.gif 2026060212.gif 2026060300.gif 2026060312.gif 2026060400.gif 2026060412.gif 2026060500.gif 2026060512.gif 2026060600.gif 2026060612.gif 2026060700.gif 2026060712.gif 2026060800.gif 2026060812.gif 2026060900.gif 2026060912.gif 2026061000.gif 2026061012.gif 2026061100.gif 2026061112.gif 2026061200.gif 2026061212.gif 2026061300.gif 2026061312.gif 2026061400.gif 2026061412.gif 2026061500.gif 2026061512.gif 2026061600.gif 2026061612.gif 2026061700.gif 2026061712.gif 2026061800.gif 2026061812.gif 2026061900.gif 2026061912.gif 2026062000.gif 2026062012.gif 2026062100.gif 2026062112.gif 2026062200.gif 2026062212.gif 2026062300.gif 2026062312.gif 2026062400.gif
/home/griffin/scripts/fli2videoMC.sh Esperance20260526_nrt_30d.fli 4
ans =
    'Esperance20260526_nrt_30d.fli'
\rm Esperance20260526_nrt_30d/*.html
html_IMOS_gl Esperance20260526_nrt_30d/
alltiftogif
alltiftogif
1 tiftogif_1map: No match.

\rm navEsperance20260526_nrt_30d/*.html
html_IMOS_gl navEsperance20260526_nrt_30d/
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062400.gif
doing trajectories
took 0.013 mins, sum=0.036
parea3 =
        121.03        122.91        -34.78        -33.39
/home/vamp1/pub_web/analysis/gliders/navEsperance20260526_nrt_12d/2026062400.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062312.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062300.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062212.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062200.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062112.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062100.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062012.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026062000.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061912.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061900.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061812.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061800.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061712.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061700.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061612.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061600.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061512.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061500.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061412.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/2026061400.gif
alltiftogif
alltiftogif
1 tiftogif_1map: No match.

ls /home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_12d/*.gif
mfli =
    'Esperance20260526_nrt_12d.fli'
/home/griffin/scripts/gifs2fliMC89.sh Esperance20260526_nrt_12d.fli 250  2026052612.gif 2026052700.gif 2026052712.gif 2026052800.gif 2026052812.gif 2026052900.gif 2026052912.gif 2026053000.gif 2026053012.gif 2026053100.gif 2026053112.gif 2026060100.gif 2026060112.gif 2026060200.gif 2026060212.gif 2026060300.gif 2026060312.gif 2026060400.gif 2026060412.gif 2026060500.gif 2026060512.gif 2026060600.gif 2026060612.gif 2026060700.gif 2026060712.gif 2026060800.gif 2026060812.gif 2026060900.gif 2026060912.gif 2026061000.gif 2026061012.gif 2026061100.gif 2026061112.gif 2026061200.gif 2026061212.gif 2026061300.gif 2026061312.gif 2026061400.gif 2026061412.gif 2026061500.gif 2026061512.gif 2026061600.gif 2026061612.gif 2026061700.gif 2026061712.gif 2026061800.gif 2026061812.gif 2026061900.gif 2026061912.gif 2026062000.gif 2026062012.gif 2026062100.gif 2026062112.gif 2026062200.gif 2026062212.gif 2026062300.gif 2026062312.gif 2026062400.gif
/home/griffin/scripts/fli2videoMC.sh Esperance20260526_nrt_12d.fli 4
ans =
    'Esperance20260526_nrt_12d.fli'
\rm Esperance20260526_nrt_12d/*.html
html_IMOS_gl Esperance20260526_nrt_12d/
alltiftogif
alltiftogif
1 tiftogif_1map: No match.

\rm navEsperance20260526_nrt_12d/*.html
html_IMOS_gl navEsperance20260526_nrt_12d/
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062400.gif
doing trajectories
took 0.0066 mins, sum=0.043
parea3 =
        121.52        122.32        -34.34        -33.75
/home/vamp1/pub_web/analysis/gliders/navEsperance20260526_nrt_4d/2026062400.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062312.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062300.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062212.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062200.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062112.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062100.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062012.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026062000.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061912.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061900.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061812.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061800.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061712.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061700.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061612.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061600.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061512.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061500.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061412.gif
/home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/2026061400.gif
alltiftogif
alltiftogif
1 tiftogif_1map: No match.

ls /home/vamp1/pub_web/analysis/gliders/Esperance20260526_nrt_4d/*.gif
mfli =
    'Esperance20260526_nrt_4d.fli'
/home/griffin/scripts/gifs2fliMC89.sh Esperance20260526_nrt_4d.fli 250  2026052612.gif 2026052700.gif 2026052712.gif 2026052800.gif 2026052812.gif 2026052900.gif 2026052912.gif 2026053000.gif 2026053012.gif 2026053100.gif 2026053112.gif 2026060100.gif 2026060112.gif 2026060200.gif 2026060212.gif 2026060300.gif 2026060312.gif 2026060400.gif 2026060412.gif 2026060500.gif 2026060512.gif 2026060600.gif 2026060612.gif 2026060700.gif 2026060712.gif 2026060800.gif 2026060812.gif 2026060900.gif 2026060912.gif 2026061000.gif 2026061012.gif 2026061100.gif 2026061112.gif 2026061200.gif 2026061212.gif 2026061300.gif 2026061312.gif 2026061400.gif 2026061412.gif 2026061500.gif 2026061512.gif 2026061600.gif 2026061612.gif 2026061700.gif 2026061712.gif 2026061800.gif 2026061812.gif 2026061900.gif 2026061912.gif 2026062000.gif 2026062012.gif 2026062100.gif 2026062112.gif 2026062200.gif 2026062212.gif 2026062300.gif 2026062312.gif 2026062400.gif
/home/griffin/scripts/fli2videoMC.sh Esperance20260526_nrt_4d.fli 4
ans =
    'Esperance20260526_nrt_4d.fli'
\rm Esperance20260526_nrt_4d/*.html
html_IMOS_gl Esperance20260526_nrt_4d/
alltiftogif
alltiftogif
1 tiftogif_1map: No match.

\rm navEsperance20260526_nrt_4d/*.html
html_IMOS_gl navEsperance20260526_nrt_4d/
ans =
             0
ls: cannot access '*.mp4': No such file or directory
ls: cannot access '*.fli': No such file or directory
rsync -av --password-file=$PWFILE --delete --timeout=480 gliders/  csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/gliders
rsync took 127s
job took 10mins
\rm /home/vamp1/intranet/cronlogs/DG/pANFOG/202605*.html
\rm /home/vamp1/intranet/cronlogs/DG/pANFOG/202605*.html
1 rm: cannot remove '/home/vamp1/intranet/cronlogs/DG/pANFOG/202605*.html': No such file or directory