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                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
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running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :59
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The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
jf =
          2.00
pANFOG starting job nrt at 13-Feb-2026 22:20:13 on oc3-hba

ans =
    'sl2025_v4  '
doing 01-Jan-2025 00:00:00 to 31-Dec-2026 00:00:00 so finishing about 21-Feb-2026 22:04:26
gltypes =
  1x1 cell array
    {'slocum_glider'}
update from thredds?: 1
loaded data for 25 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/sl2025_v4. Last10:
PortLincoln20260210  28 13-Feb-2026 18:21:45 
PortLincoln20260123  161 13-Feb-2026 06:21:47 
Forster20260122      111 04-Feb-2026 22:21:08 
TwoRocks20260116     172 09-Feb-2026 12:21:49 
MissionBeach20260115 216 13-Feb-2026 10:21:07 
Adelaide20251128     106 12-Dec-2025 08:21:02 
MissionBeach20251121 726 11-Dec-2025 14:21:21 
Yamba20251113        174 04-Dec-2025 08:21:44 
TwoRocks20251028     106 11-Nov-2025 12:21:47 
Weipa20251024        155 12-Nov-2025 08:21:43 
TasEastCoast20251022 156 10-Nov-2025 10:22:09 
  folder       nfol datespan   nnow reading
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/slocum_glider/catalog.xml'
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/BassStrait20250501/IMOS_ANFOG_BCEOSTUV_20250501T053639Z_SL212_FV00_timeseries_END-20250518T221720Z.nc'}
                                                                                
13-Feb-2026 22:20:42 Found 1 .nc files in IMOS/ANFOG/REALTIME/BassStrait20250501
BassStrait20250501   had data til 18-May-2025 21:54:48
not checking for gap-filling files
found 0 uncached .nc files in timerange for BassStrait20250501
BassStrait20250501 1: 01-May-2025 - 18-May-2025 0:  - 
had already: 1:  01-May-2025 06:18:27 - 18-May-2025 21:54:48
slocum_glider BassStrait20250501   had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Forster20250507/IMOS_ANFOG_BCEOSTUV_20250506T231155Z_SL248_FV00_timeseries_END-20250601T230011Z.nc'}
                                                                             
13-Feb-2026 22:20:43 Found 1 .nc files in IMOS/ANFOG/REALTIME/Forster20250507
Forster20250507      had data til 01-Jun-2025 22:30:44
not checking for gap-filling files
found 0 uncached .nc files in timerange for Forster20250507
Forster20250507 1: 06-May-2025 - 01-Jun-2025 0:  - 
had already: 1:  06-May-2025 23:22:38 - 01-Jun-2025 22:30:44
slocum_glider Forster20250507      had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Forster20260122/IMOS_ANFOG_BCEOSTUV_20260121T213506Z_SL995_FV00_timeseries_END-20260204T100426Z.nc'}
                                                                             
13-Feb-2026 22:20:43 Found 1 .nc files in IMOS/ANFOG/REALTIME/Forster20260122
Forster20260122      had data til 04-Feb-2026 09:06:58
not checking for gap-filling files
found 0 uncached .nc files in timerange for Forster20260122
Forster20260122 1: 21-Jan-2026 - 04-Feb-2026 0:  - 
had already: 111:  21-Jan-2026 21:47:49 - 04-Feb-2026 09:06:58
slocum_glider Forster20260122      had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20251121/IMOS_ANFOG_BCEOSTUV_20251121T001248Z_SL209_FV00_timeseries_END-20251215T212519Z.nc'}
                                                                                  
13-Feb-2026 22:20:44 Found 1 .nc files in IMOS/ANFOG/REALTIME/MissionBeach20251121
MissionBeach20251121 had data til 08-Dec-2025 23:06:05
not checking for gap-filling files
found 1 uncached .nc files in timerange for MissionBeach20251121
MissionBeach20251121 1: 21-Nov-2025 - 15-Dec-2025 1: 21-Nov-2025 00:12:48 - 15-Dec-2025 21:25:19
had already: 726:  21-Nov-2025 00:22:48 - 08-Dec-2025 23:06:05
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20251121/IMOS_ANFOG_BCEOSTUV_20251121T001248Z_SL209_FV00_timeseries_END-20251215T212519Z.nc
max(julall)= 15-Dec-2025 21:25:19
length(julall)= 35360
range(find(cndci>2))= 1  28242
range(find(julall>maxjulj))= 28243  35360
slocum_glider MissionBeach20251121 has 727 dives in area 146 147 -18 -17.1 during 21-Nov-2025 00:22:48 to 08-Dec-2025 23:06:05
file_list =
  2x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260115/IMOS_ANFOG_BCEOSTUV_20260115T012138Z_SL209_FV00_timeseries_END-20260212T154726Z.nc'}
    {'IMOS/ANFOG/REALTIME/slocum_glider/MissionBeach20260115/IMOS_ANFOG_BCEOSTUV_20260115T012138Z_SL209_FV00_timeseries_END-20260212T215724Z.nc'}
                                                                                  
13-Feb-2026 22:20:48 Found 1 .nc files in IMOS/ANFOG/REALTIME/MissionBeach20260115
MissionBeach20260115 had data til 12-Feb-2026 20:58:08
not checking for gap-filling files
found 0 uncached .nc files in timerange for MissionBeach20260115
MissionBeach20260115 1: 15-Jan-2026 - 12-Feb-2026 0:  - 
had already: 216:  15-Jan-2026 01:31:43 - 12-Feb-2026 20:58:08
........
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20241119/IMOS_ANFOG_BCEOSTUV_20241119T012503Z_SL994_FV00_timeseries_END-20241211T000614Z.nc'}
                                                                            
13-Feb-2026 22:20:48 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20241119
Onslow20241119       had data til 10-Dec-2024 23:23:05
not checking for gap-filling files
found 0 uncached .nc files in timerange for Onslow20241119
Onslow20241119 1: 19-Nov-2024 - 11-Dec-2024 0:  - 
had already: 1:  19-Nov-2024 02:01:10 - 10-Dec-2024 23:23:05
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250129/IMOS_ANFOG_BCEOSTUV_20250129T061653Z_SL812_FV00_timeseries_END-20250130T135435Z.nc'}
                                                                            
13-Feb-2026 22:20:49 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20250129
Onslow20250129       had data til 30-Jan-2025 08:53:39
not checking for gap-filling files
found 1 uncached .nc files in timerange for Onslow20250129
Onslow20250129 1: 29-Jan-2025 - 30-Jan-2025 1: 29-Jan-2025 06:16:53 - 30-Jan-2025 13:54:35
had already: 1169:  29-Jan-2025 06:23:58 - 30-Jan-2025 08:53:39
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250129/IMOS_ANFOG_BCEOSTUV_20250129T061653Z_SL812_FV00_timeseries_END-20250130T135435Z.nc
max(julall)= 30-Jan-2025 13:54:35
length(julall)= 1541
range(find(cndci>2))= 2  1541
range(find(julall>maxjulj))= 1372  1541
2025-01-30T15:46:17Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
169 169 24        
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 155.842       167.388       181.276
expected 169 records with 0>depth<3000 but found only 0 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250129/IMOS_ANFOG_BCEOSTUV_20250129T061653Z_SL812_FV00_timeseries_END-20250130T135435Z.nc
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250225/IMOS_ANFOG_BCEOSTUV_20250225T013137Z_SL248_FV00_timeseries_END-20250319T043227Z.nc'}
                                                                            
13-Feb-2026 22:21:06 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20250225
Onslow20250225       had data til 19-Mar-2025 03:58:04
not checking for gap-filling files
found 0 uncached .nc files in timerange for Onslow20250225
Onslow20250225 1: 25-Feb-2025 - 19-Mar-2025 0:  - 
had already: 1:  25-Feb-2025 01:45:11 - 19-Mar-2025 03:58:04
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/PortLincoln20250529/IMOS_ANFOG_BCEOSTUV_20250529T022639Z_SL227_FV00_timeseries_END-20250617T005027Z.nc'}
                                                                                 
13-Feb-2026 22:21:06 Found 1 .nc files in IMOS/ANFOG/REALTIME/PortLincoln20250529
PortLincoln20250529  had data til 16-Jun-2025 23:50:17
not checking for gap-filling files
found 0 uncached .nc files in timerange for PortLincoln20250529
PortLincoln20250529 1: 29-May-2025 - 17-Jun-2025 0:  - 
had already: 1:  29-May-2025 02:35:21 - 16-Jun-2025 23:50:17
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/PortLincoln20260123/IMOS_ANFOG_BCEOSTUV_20260123T010420Z_SL248_FV00_timeseries_END-20260213T080754Z.nc'}
                                                                                 
13-Feb-2026 22:21:07 Found 1 .nc files in IMOS/ANFOG/REALTIME/PortLincoln20260123
PortLincoln20260123  had data til 12-Feb-2026 16:22:35
not checking for gap-filling files
found 1 uncached .nc files in timerange for PortLincoln20260123
PortLincoln20260123 1: 23-Jan-2026 - 13-Feb-2026 1: 23-Jan-2026 01:04:20 - 13-Feb-2026 08:07:54
had already: 161:  23-Jan-2026 01:14:53 - 12-Feb-2026 16:22:35
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/PortLincoln20260123/IMOS_ANFOG_BCEOSTUV_20260123T010420Z_SL248_FV00_timeseries_END-20260213T080754Z.nc
max(julall)= 13-Feb-2026 08:07:54
length(julall)= 87110
range(find(cndci>2))= 2  87083
range(find(julall>maxjulj))= 84041  87110
2026-02-13T08:29:48Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
3043 3042 191     
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 221.18           243        268.07
expected 3043 records with 0>depth<3000 but found only 0 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/PortLincoln20260123/IMOS_ANFOG_BCEOSTUV_20260123T010420Z_SL248_FV00_timeseries_END-20260213T080754Z.nc
file_list =
     []
                                                                                 
13-Feb-2026 22:21:29 Found 0 .nc files in IMOS/ANFOG/REALTIME/PortLincoln20260210
not checking for gap-filling files
found 0 uncached .nc files in timerange for PortLincoln20260210
>>