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9.4.0.813654 (R2018a)
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jf =
          2.00
pANFOG starting job nrt at 18-Jul-2025 12:20:13 on oc3-hba

ans =
    'sl2025_v3  '
doing 01-Jan-2024 00:00:00 to 31-Dec-2025 00:00:00 so finishing about 26-Jul-2025 12:20:13
gltypes =
  1x1 cell array
    {'slocum_glider'}
update from thredds?: 1
loaded data for 7 missions from /home/vamp1/varney/gri159/IMOScache/ANFOG/sl2025_v3. Last10:
Yamba20241113    1 11-Jul-2025 20:24:23 
TwoRocks20250515 1 11-Jul-2025 20:24:05 
TwoRocks20250219 59 11-Jul-2025 20:23:50 
Portland20250522 1 11-Jul-2025 20:23:32 
Onslow20250225   1 11-Jul-2025 20:23:16 
Onslow20250129   59 11-Jul-2025 20:22:58 
Onslow20241119   1 11-Jul-2025 20:22:42 
  folder       nfol datespan   nnow reading
catfile =
    'https://thredds.aodn.org.au/thredds/catalog/IMOS/ANFOG/REALTIME/slocum_glider/catalog.xml'
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20241119/IMOS_ANFOG_BCEOSTUV_20241119T012503Z_SL994_FV00_timeseries_END-20241211T000614Z.nc'}
                                                                            
18-Jul-2025 12:21:25 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20241119
Onslow20241119   had data til 10-Dec-2024 23:23:05
not checking for gap-filling files
found 0 uncached .nc files in timerange for Onslow20241119
Onslow20241119 1: 19-Nov-2024 - 11-Dec-2024 0:  - 
had already: 1:  19-Nov-2024 02:01:10 - 10-Dec-2024 23:23:05
slocum_glider Onslow20241119   had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250129/IMOS_ANFOG_BCEOSTUV_20250129T061653Z_SL812_FV00_timeseries_END-20250130T135435Z.nc'}
                                                                            
18-Jul-2025 12:21:26 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20250129
Onslow20250129   had data til 30-Jan-2025 08:53:39
not checking for gap-filling files
found 1 uncached .nc files in timerange for Onslow20250129
Onslow20250129 1: 29-Jan-2025 - 30-Jan-2025 1: 29-Jan-2025 06:16:53 - 30-Jan-2025 13:54:35
had already: 59:  29-Jan-2025 06:23:58 - 30-Jan-2025 08:53:39
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250129/IMOS_ANFOG_BCEOSTUV_20250129T061653Z_SL812_FV00_timeseries_END-20250130T135435Z.nc
max(julall)= 30-Jan-2025 13:54:35
length(julall)= 1541
range(find(cndci>2))= 2  1541
range(find(julall>maxjulj))= 1372  1541
2025-01-30T15:46:17Z Written by MATLAB script sl_netcdfRT.m v5.
stride=1
nwant ngaps  ngood
169 169 24        
WARNING: Failed trying to access variable: UCUR_GPS
WARNING: Failed trying to access variable: HEAD
5,50,95 DOX1= 155.842       167.388       181.276
expected 169 records with 0>depth<3000 but found only 0 in https://thredds.aodn.org.au/thredds/dodsC/IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250129/IMOS_ANFOG_BCEOSTUV_20250129T061653Z_SL812_FV00_timeseries_END-20250130T135435Z.nc
slocum_glider Onslow20250129   has 60 dives in area 115 115 -21.4 -21.3 during 29-Jan-2025 06:23:58 to 30-Jan-2025 08:53:39
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Onslow20250225/IMOS_ANFOG_BCEOSTUV_20250225T013137Z_SL248_FV00_timeseries_END-20250319T043227Z.nc'}
                                                                            
18-Jul-2025 12:21:43 Found 1 .nc files in IMOS/ANFOG/REALTIME/Onslow20250225
Onslow20250225   had data til 19-Mar-2025 03:58:04
not checking for gap-filling files
found 0 uncached .nc files in timerange for Onslow20250225
Onslow20250225 1: 25-Feb-2025 - 19-Mar-2025 0:  - 
had already: 1:  25-Feb-2025 01:45:11 - 19-Mar-2025 03:58:04
slocum_glider Onslow20250225   had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Portland20250522/IMOS_ANFOG_BCEOSTUV_20250522T014642Z_SL287_FV00_timeseries_END-20250522T025759Z.nc'}
                                                                              
18-Jul-2025 12:21:43 Found 1 .nc files in IMOS/ANFOG/REALTIME/Portland20250522
Portland20250522 had data til 22-May-2025 02:57:59
not checking for gap-filling files
found 0 uncached .nc files in timerange for Portland20250522
Portland20250522 1: 22-May-2025 - 22-May-2025 0:  - 
had already: 1:  22-May-2025 01:59:59 - 22-May-2025 02:57:59
slocum_glider Portland20250522 had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/TwoRocks20250219/IMOS_ANFOG_BCEOSTUV_20250219T052938Z_SL227_FV00_timeseries_END-20250316T210929Z.nc'}
                                                                              
18-Jul-2025 12:21:43 Found 1 .nc files in IMOS/ANFOG/REALTIME/TwoRocks20250219
TwoRocks20250219 had data til 15-Mar-2025 04:16:53
not checking for gap-filling files
found 1 uncached .nc files in timerange for TwoRocks20250219
TwoRocks20250219 1: 19-Feb-2025 - 16-Mar-2025 1: 19-Feb-2025 05:29:38 - 16-Mar-2025 21:09:29
had already: 59:  19-Feb-2025 05:36:58 - 15-Mar-2025 04:16:53
reading file 1 of 1 IMOS/ANFOG/REALTIME/slocum_glider/TwoRocks20250219/IMOS_ANFOG_BCEOSTUV_20250219T052938Z_SL227_FV00_timeseries_END-20250316T210929Z.nc
max(julall)= 16-Mar-2025 21:09:29
length(julall)= 54536
range(find(cndci>2))= 2  54468
range(find(julall>maxjulj))= 54469  54536
slocum_glider TwoRocks20250219 has 60 dives in area 115 116 -31.9 -31.1 during 19-Feb-2025 05:36:58 to 15-Mar-2025 04:16:53
........
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/TwoRocks20250515/IMOS_ANFOG_BCEOSTUV_20250515T073809Z_SL812_FV00_timeseries_END-20250518T070709Z.nc'}
                                                                              
18-Jul-2025 12:21:46 Found 1 .nc files in IMOS/ANFOG/REALTIME/TwoRocks20250515
TwoRocks20250515 had data til 18-May-2025 06:16:25
not checking for gap-filling files
found 0 uncached .nc files in timerange for TwoRocks20250515
TwoRocks20250515 1: 15-May-2025 - 18-May-2025 0:  - 
had already: 1:  15-May-2025 07:45:16 - 18-May-2025 06:16:25
slocum_glider TwoRocks20250515 had no new data in the time period
file_list =
  1x1 cell array
    {'IMOS/ANFOG/REALTIME/slocum_glider/Yamba20241113/IMOS_ANFOG_BCEOSTUV_20241113T020013Z_SL995_FV00_timeseries_END-20241127T223327Z.nc'}
                                                                           
18-Jul-2025 12:21:46 Found 1 .nc files in IMOS/ANFOG/REALTIME/Yamba20241113
Yamba20241113    had data til 27-Nov-2024 22:13:25
not checking for gap-filling files
found 0 uncached .nc files in timerange for Yamba20241113
Yamba20241113 1: 13-Nov-2024 - 27-Nov-2024 0:  - 
had already: 1:  13-Nov-2024 02:07:41 - 27-Nov-2024 22:13:25
slocum_glider Yamba20241113    had no new data in the time period
        
summary:
slocum_glider Onslow20241119   has 1 dives in area 114 115 -21.5 -20.7 during 19-Nov-2024 02:01:10 to 10-Dec-2024 23:23:05
slocum_glider Onslow20250129   has 60 dives in area 115 115 -21.4 -21.3 during 29-Jan-2025 06:23:58 to 30-Jan-2025 08:53:39
slocum_glider Onslow20250225   has 1 dives in area 114 115 -22.2 -21 during 25-Feb-2025 01:45:11 to 19-Mar-2025 03:58:04
slocum_glider Portland20250522 has 1 dives in area 141 141 -38.3 -38.3 during 22-May-2025 01:59:59 to 22-May-2025 02:57:59
slocum_glider TwoRocks20250219 has 60 dives in area 115 116 -31.9 -31.1 during 19-Feb-2025 05:36:58 to 15-Mar-2025 04:16:53
slocum_glider TwoRocks20250515 has 1 dives in area 115 116 -31.9 -31.6 during 15-May-2025 07:45:16 to 18-May-2025 06:16:25
slocum_glider Yamba20241113    has 1 dives in area 153 154 -32.1 -29.4 during 13-Nov-2024 02:07:41 to 27-Nov-2024 22:13:25
cqOK=No_QC_performedGood_dataProbably_good_dataBad_data_that_are_potentially_correctableBad_dataValue_changedNot_used
ln -s -f /home/vamp1/varney/gri159/IMOScache/ANFOG/sl2025_v3.mat /home/vamp1/varney/gri159/IMOScache/ANFOG/latest_nrt_sl.mat
calculating glider velocities
Onslow20241119   travelled 361 km
Onslow20250129   travelled 21 km
Onslow20250225   travelled 400 km
Portland20250522 travelled 1 km
TwoRocks20250219 travelled 524 km
TwoRocks20250515 travelled 78 km
Yamba20241113    travelled 440 km
saving glider velocities
                                       
Onslow20241119   564 surfacings to 30m.
                                      
Onslow20250129   46 surfacings to 30m.
                                       
Onslow20250225   378 surfacings to 30m.
                                     
Portland20250522 2 surfacings to 30m.
                                        
TwoRocks20250219 1920 surfacings to 30m.
                                       
TwoRocks20250515 253 surfacings to 30m.
                                       
Yamba20241113    788 surfacings to 30m.
saving /home/vamp1/varney/gri159/IMOScache/ANFOG/sl2025_v3_c.mat
getting CARS
got it
        
Yearmaps
Yamba20241113    has 34958 data points in 2024
Onslow20241119   has 41256 data points in 2024
/home/vamp1/pub_web/analysis/gliders/yearmaps/2024_sl_temp_nrt.gif
Portland20250522 has 95 data points in 2025
TwoRocks20250219 has 54044 data points in 2025
TwoRocks20250515 has 5393 data points in 2025
Onslow20250129   has 1313 data points in 2025
Onslow20250225   has 48183 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_temp_nrt.gif
Yamba20241113    has 34958 data points in 2024
Onslow20241119   has 41256 data points in 2024
/home/vamp1/pub_web/analysis/gliders/yearmaps/2024_sl_tempa_nrt.gif
Portland20250522 has 95 data points in 2025
TwoRocks20250219 has 54044 data points in 2025
TwoRocks20250515 has 5393 data points in 2025
Onslow20250129   has 1313 data points in 2025
Onslow20250225   has 48183 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_tempa_nrt.gif
Yamba20241113    has 34958 data points in 2024
Onslow20241119   has 41256 data points in 2024
/home/vamp1/pub_web/analysis/gliders/yearmaps/2024_sl_psal_nrt.gif
Portland20250522 has 95 data points in 2025
TwoRocks20250219 has 54044 data points in 2025
TwoRocks20250515 has 5393 data points in 2025
Onslow20250129   has 1313 data points in 2025
Onslow20250225   has 48183 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_psal_nrt.gif
Yamba20241113    has 34958 data points in 2024
Onslow20241119   has 41256 data points in 2024
/home/vamp1/pub_web/analysis/gliders/yearmaps/2024_sl_psala_nrt.gif
Portland20250522 has 95 data points in 2025
TwoRocks20250219 has 54044 data points in 2025
TwoRocks20250515 has 5393 data points in 2025
Onslow20250129   has 1313 data points in 2025
Onslow20250225   has 48183 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_psala_nrt.gif
Yamba20241113    has 34958 data points in 2024
Onslow20241119   has 41256 data points in 2024
/home/vamp1/pub_web/analysis/gliders/yearmaps/2024_sl_flu2_nrt.gif
Portland20250522 has 95 data points in 2025
TwoRocks20250219 has 54044 data points in 2025
TwoRocks20250515 has 5393 data points in 2025
Onslow20250129   has 1313 data points in 2025
Onslow20250225   has 48183 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_flu2_nrt.gif
Yamba20241113    has 34958 data points in 2024
Onslow20241119   has 41256 data points in 2024
/home/vamp1/pub_web/analysis/gliders/yearmaps/2024_sl_doxy_nrt.gif
Portland20250522 has 95 data points in 2025
TwoRocks20250219 has 54044 data points in 2025
TwoRocks20250515 has 5393 data points in 2025
Onslow20250129   has 1313 data points in 2025
Onslow20250225   has 48183 data points in 2025
/home/vamp1/pub_web/analysis/gliders/yearmaps/2025_sl_doxy_nrt.gif
                 
Mission T/S plots
                             
Mission map and section plots
ans =
             0
ls: cannot access '*.mp4': No such file or directory
ls: cannot access '*.fli': No such file or directory
rsync -av --password-file=$PWFILE --delete --timeout=480 gliders/  csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/gliders
rsync took 64s
job took 4mins
\rm /home/vamp1/intranet/cronlogs/DG/pANFOG/202505*.html
\rm /home/vamp1/intranet/cronlogs/DG/pANFOG/202505*.html
1 rm: cannot remove '/home/vamp1/intranet/cronlogs/DG/pANFOG/202505*.html': No such file or directory