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                  Copyright 1984-2018 The MathWorks, Inc.
                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
To get started, type one of these: helpwin, helpdesk, or demo.
For product information, visit www.mathworks.com.
 
running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :67
[Warning: MATLAB has disabled some advanced graphics rendering features by
switching to software OpenGL. For more information, click here.] 
The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
starting fishsoop at 12-May-2026 14:05:13
loaded cached data from 5925 files for 2026 spanning 23/Oct/2025 to 11/May/2026.
cataloging AODN at https://thredds.aodn.org.au/thredds/catalog/IMOS/SOOP/SOOP-FishSOOP/REALTIME/2026/catalog.xml
AODN has 5944 files, last being IMOS/SOOP/SOOP-FishSOOP/REALTIME/2026/05/IMOS_SOOP-FishSOOP_TP_20260512T025524Z_FV01_1017.nc. Reading 19
1/19 fishsoop_temp_5798.nc
updating cache by reading 19 files took 12-May-2026 14:05:27 to 12-May-2026 14:05:38
 
deployment time of oldest new file is 06-May-2026 18:15:56
 
New files were found in 7days between 06/05/2026 and 12/05/2026 (an interval of 6 days)
 
CLNAME - "CARS_latest" version being used by default.
[  This warning once per session only  ]
/home/gri159/scripts/xwget.sh -O index_202605121405_L3SM-1d.nc -N -t 4 --no-check-certificate https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3SM-1d/index.nc
https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/index.nc has 536 L3SM-1d files for the requested 367d-long period 
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [2  1])
\rm index_202605121405_L3SM-1d.nc
searching 5944 files for data during 7 days
updated /home/vamp1/varney/gri159/IMOScache/fishsoop/metadata_2026_v4.mat
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260506.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260511.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260512.gif
starting dohtml(1) at 12-May-2026 14:06:00
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/ has 365 dates
ln -sf 20261231.html latest.html
ln -sf 20261231.gif latest.gif
finished htm_index at 12-May-2026 14:06:02. Took 1 s
loading /home/vamp1/varney/gri159/IMOScache/fishsoop/metadata_2026_v4.mat
Before sorting: 365 1  1  1
After: 365 1  1  1
writing clickable maps for 132 dates in 2026 to 2026
6 regions had data on 2026/20260101
9 regions had data on 2026/20260111
9 regions had data on 2026/20260121
9 regions had data on 2026/20260131
10 regions had data on 2026/20260210
11 regions had data on 2026/20260220
9 regions had data on 2026/20260302
8 regions had data on 2026/20260312
11 regions had data on 2026/20260322
6 regions had data on 2026/20260401
5 regions had data on 2026/20260411
8 regions had data on 2026/20260421
7 regions had data on 2026/20260501
5 regions had data on 2026/20260511
ln -sf 20260512.html latest.html
ln -sf 20260512.gif latest.gif
finished dohtml(1) at 12-May-2026 14:06:04. Took 4 s
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/2026/20260506152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 70
/home/vamp1/pub_web/analysis/fishsoop/Darwin/2026/20260506.gif
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260506.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260506.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260506.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260506.gif
126 of 7 0.0103h, ETA: 12-May-2026 14:06:24
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/RT/20260507152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 75
/home/vamp1/pub_web/analysis/fishsoop/Darwin/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260507.gif
127 of 7 0.0244h, ETA: 12-May-2026 14:06:27
/home/vamp1/pub_web/analysis/fishsoop/Darwin/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260508.gif
128 of 7 0.0401h, ETA: 12-May-2026 14:06:30
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/RT/20260510152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 77
/home/vamp1/pub_web/analysis/fishsoop/Darwin/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260509.gif
129 of 7 0.0621h, ETA: 12-May-2026 14:06:34
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/TasW/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260510.gif
130 of 7 0.0897h, ETA: 12-May-2026 14:06:39
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/RT/20260511152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 62
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260511.gif
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/20260511.gif
/home/vamp1/pub_web/analysis/fishsoop/TasW/2026/20260511.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260511.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260511.gif
131 of 7 0.103h, ETA: 12-May-2026 14:06:42
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260512.gif
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/20260512.gif
/home/vamp1/pub_web/analysis/fishsoop/TasW/2026/20260512.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260512.gif
132 of 7 0.111h, ETA: 12-May-2026 14:06:43
/home/vamp1/pub_web/analysis/fishsoop/Darwin/2026/
/home/vamp1/pub_web/analysis/fishsoop/Darwin/2026/ has 128 dates
ln -sf 20260509.html latest.html
ln -sf 20260509.gif latest.gif
finished htm_index at 12-May-2026 14:13:03. Took 2 s
/home/vamp1/pub_web/analysis/fishsoop/Kimberley/2026/
/home/vamp1/pub_web/analysis/fishsoop/Kimberley/2026/ has 1 dates
ln -sf index.html latest.html
ln -sf index.gif latest.gif
finished htm_index at 12-May-2026 14:13:03. Took 2 s
/home/vamp1/pub_web/analysis/fishsoop/NWS/2026/
/home/vamp1/pub_web/analysis/fishsoop/NWS/2026/ has 2 dates
ln -sf 20260111.html latest.html
ln -sf 20260111.gif latest.gif
finished htm_index at 12-May-2026 14:13:03. Took 2 s
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/ has 48 dates
ln -sf 20260510.html latest.html
ln -sf 20260510.gif latest.gif
finished htm_index at 12-May-2026 14:13:04. Took 3 s
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/ has 132 dates
ln -sf 20260512.html latest.html
ln -sf 20260512.gif latest.gif
finished htm_index at 12-May-2026 14:13:06. Took 5 s
/home/vamp1/pub_web/analysis/fishsoop/AlbEsp/2026/
/home/vamp1/pub_web/analysis/fishsoop/AlbEsp/2026/ has 1 dates
ln -sf index.html latest.html
ln -sf index.gif latest.gif
finished htm_index at 12-May-2026 14:13:06. Took 5 s
/home/vamp1/pub_web/analysis/fishsoop/RechEyre/2026/
/home/vamp1/pub_web/analysis/fishsoop/RechEyre/2026/ has 67 dates
ln -sf 20260406.html latest.html
ln -sf 20260406.gif latest.gif
finished htm_index at 12-May-2026 14:13:07. Took 6 s
/home/vamp1/pub_web/analysis/fishsoop/SAgulfs/2026/
/home/vamp1/pub_web/analysis/fishsoop/SAgulfs/2026/ has 79 dates
ln -sf 20260501.html latest.html
ln -sf 20260501.gif latest.gif
finished htm_index at 12-May-2026 14:13:08. Took 7 s
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/ has 76 dates
ln -sf 20260512.html latest.html
ln -sf 20260512.gif latest.gif
finished htm_index at 12-May-2026 14:13:09. Took 8 s
/home/vamp1/pub_web/analysis/fishsoop/TasW/2026/
/home/vamp1/pub_web/analysis/fishsoop/TasW/2026/ has 91 dates
ln -sf 20260512.html latest.html
ln -sf 20260512.gif latest.gif
finished htm_index at 12-May-2026 14:13:10. Took 9 s
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/ has 109 dates
ln -sf 20260510.html latest.html
ln -sf 20260510.gif latest.gif
finished htm_index at 12-May-2026 14:13:11. Took 10 s
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/ has 132 dates
ln -sf 20260512.html latest.html
ln -sf 20260512.gif latest.gif
finished htm_index at 12-May-2026 14:13:14. Took 13 s
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/ has 131 dates
ln -sf 20260511.html latest.html
ln -sf 20260511.gif latest.gif
finished htm_index at 12-May-2026 14:13:15. Took 14 s
/home/vamp1/pub_web/analysis/fishsoop/SGBR/2026/
/home/vamp1/pub_web/analysis/fishsoop/SGBR/2026/ has 6 dates
ln -sf 20260325.html latest.html
ln -sf 20260325.gif latest.gif
finished htm_index at 12-May-2026 14:13:15. Took 14 s
/home/vamp1/pub_web/analysis/fishsoop/CGBR/2026/
/home/vamp1/pub_web/analysis/fishsoop/CGBR/2026/ has 1 dates
ln -sf index.html latest.html
ln -sf index.gif latest.gif
finished htm_index at 12-May-2026 14:13:16. Took 15 s
/home/vamp1/pub_web/analysis/fishsoop/NGBR/2026/
/home/vamp1/pub_web/analysis/fishsoop/NGBR/2026/ has 14 dates
ln -sf 20260301.html latest.html
ln -sf 20260301.gif latest.gif
finished htm_index at 12-May-2026 14:13:16. Took 15 s
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/ has 114 dates
ln -sf 20260510.html latest.html
ln -sf 20260510.gif latest.gif
finished htm_index at 12-May-2026 14:13:17. Took 16 s
/home/vamp1/pub_web/analysis/fishsoop/Au/2026/
/home/vamp1/pub_web/analysis/fishsoop/Au/2026/ has 1 dates
ln -sf 20260401.html latest.html
ln -sf 20260401.gif latest.gif
finished htm_index at 12-May-2026 14:13:17. Took 16 s
finished fishsoop plotting at 12-May-2026 14:13:17 (8.07mins work so far, now syncing...)
saved data from 5944 files in /home/vamp1/varney/gri159/IMOScache/fishsoop/data_2026_v4
rsync -av --delete --password-file=$PWFILE fishsoop/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/fishsoop
finished fishsoop at 12-May-2026 14:14:25 (9.2mins work)