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                  Copyright 1984-2018 The MathWorks, Inc.
                   R2018a (9.4.0.813654) 64-bit (glnxa64)
                             February 23, 2018

 
To get started, type one of these: helpwin, helpdesk, or demo.
For product information, visit www.mathworks.com.
 
running startup.m for version
9.4.0.813654 (R2018a)
Assuming you have NOT paid for the stats toolbox, but have your own versions of things like range()
Display: :67
[Warning: MATLAB has disabled some advanced graphics rendering features by
switching to software OpenGL. For more information, click here.] 
The state of warning 'MATLAB:interp1:NaNinY' is 'off'.
starting fishsoop at 10-May-2026 14:05:13
loaded cached data from 5750 files for 2026 spanning 23/Oct/2025 to 09/May/2026.
cataloging AODN at https://thredds.aodn.org.au/thredds/catalog/IMOS/SOOP/SOOP-FishSOOP/REALTIME/2026/catalog.xml
AODN has 5798 files, last being IMOS/SOOP/SOOP-FishSOOP/REALTIME/2026/05/IMOS_SOOP-FishSOOP_TP_20260510T033554Z_FV01_1114.nc. Reading 48
1/48 fishsoop_temp_5462.nc
21/48 fishsoop_temp_5771.nc
41/48 fishsoop_temp_5791.nc
updating cache by reading 48 files took 10-May-2026 14:05:26 to 10-May-2026 14:05:49
 
deployment time of oldest new file is 29-Apr-2026 18:01:38
 
New files were found in 11days between 29/04/2026 and 10/05/2026 (an interval of 11 days)
 
CLNAME - "CARS_latest" version being used by default.
[  This warning once per session only  ]
/home/gri159/scripts/xwget.sh -O index_202605101405_L3SM-1d.nc -N -t 4 --no-check-certificate https://mrs-data.csiro.au/thredds/fileServer/imos-srs/sst/ghrsst/L3SM-1d/index.nc
https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/index.nc has 525 L3SM-1d files for the requested 367d-long period 
xgetnc doing permute(values, [2  1])
xgetnc doing permute(values, [2  1])
\rm index_202605101405_L3SM-1d.nc
searching 5798 files for data during 11 days
updated /home/vamp1/varney/gri159/IMOScache/fishsoop/metadata_2026_v4.mat
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260429.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260430.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260501.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260502.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260503.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260505.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260506.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/20260510.gif
starting dohtml(1) at 10-May-2026 14:06:22
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/
/home/vamp1/pub_web/analysis/fishsoop/maps/2026/ has 365 dates
ln -sf 20261231.html latest.html
ln -sf 20261231.gif latest.gif
finished htm_index at 10-May-2026 14:06:22. Took 1 s
loading /home/vamp1/varney/gri159/IMOScache/fishsoop/metadata_2026_v4.mat
Before sorting: 365 1  1  1
After: 365 1  1  1
writing clickable maps for 130 dates in 2026 to 2026
6 regions had data on 2026/20260101
9 regions had data on 2026/20260111
9 regions had data on 2026/20260121
9 regions had data on 2026/20260131
10 regions had data on 2026/20260210
11 regions had data on 2026/20260220
9 regions had data on 2026/20260302
8 regions had data on 2026/20260312
11 regions had data on 2026/20260322
6 regions had data on 2026/20260401
5 regions had data on 2026/20260411
8 regions had data on 2026/20260421
6 regions had data on 2026/20260501
ln -sf 20260510.html latest.html
ln -sf 20260510.gif latest.gif
finished dohtml(1) at 10-May-2026 14:06:25. Took 3 s
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/2026/20260429152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 64
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260429.gif
/home/vamp1/pub_web/analysis/fishsoop/SAgulfs/2026/20260429.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260429.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260429.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260429.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260429.gif
119 of 11 0.0185h, ETA: 10-May-2026 14:06:52
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/2026/20260430152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 67
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260430.gif
/home/vamp1/pub_web/analysis/fishsoop/SAgulfs/2026/20260430.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260430.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260430.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260430.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260430.gif
120 of 11 0.0393h, ETA: 10-May-2026 14:06:58
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/RT/20260501152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 66
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260501.gif
/home/vamp1/pub_web/analysis/fishsoop/SAgulfs/2026/20260501.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260501.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260501.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260501.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260501.gif
121 of 11 0.0575h, ETA: 10-May-2026 14:07:04
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/2026/20260502152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 73
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260502.gif
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/20260502.gif
/home/vamp1/pub_web/analysis/fishsoop/TasW/2026/20260502.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260502.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260502.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260502.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260502.gif
122 of 11 0.0857h, ETA: 10-May-2026 14:07:13
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/RT/20260503152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 63
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260503.gif
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/20260503.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260503.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260503.gif
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/20260503.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260503.gif
123 of 11 0.102h, ETA: 10-May-2026 14:07:18
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/RT/20260505152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 71
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260505.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260505.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260505.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260505.gif
125 of 11 0.111h, ETA: 10-May-2026 14:07:21
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260506.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260506.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260506.gif
126 of 11 0.118h, ETA: 10-May-2026 14:07:22
probing https://mrs-data.csiro.au/thredds/dodsC/imos-srs/sst/ghrsst/L3SM-1d/ngt/RT/20260507152000-ABOM-L3S_GHRSST-SSTskin-MultiSensor-1d_night-v02.0-fv01.0.nc
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
xgetnc doing permute(values, [3  2  1])
%bad (ql<3): 75
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260507.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260507.gif
127 of 11 0.136h, ETA: 10-May-2026 14:07:28
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260508.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260508.gif
128 of 11 0.145h, ETA: 10-May-2026 14:07:30
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/20260509.gif
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/20260509.gif
129 of 11 0.157h, ETA: 10-May-2026 14:07:34
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/20260510.gif
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/20260510.gif
130 of 11 0.162h, ETA: 10-May-2026 14:07:35
/home/vamp1/pub_web/analysis/fishsoop/Darwin/2026/
/home/vamp1/pub_web/analysis/fishsoop/Darwin/2026/ has 114 dates
ln -sf 20260425.html latest.html
ln -sf 20260425.gif latest.gif
finished htm_index at 10-May-2026 14:16:31. Took 1 s
/home/vamp1/pub_web/analysis/fishsoop/Kimberley/2026/
/home/vamp1/pub_web/analysis/fishsoop/Kimberley/2026/ has 1 dates
ln -sf index.html latest.html
ln -sf index.gif latest.gif
finished htm_index at 10-May-2026 14:16:31. Took 1 s
/home/vamp1/pub_web/analysis/fishsoop/NWS/2026/
/home/vamp1/pub_web/analysis/fishsoop/NWS/2026/ has 2 dates
ln -sf 20260111.html latest.html
ln -sf 20260111.gif latest.gif
finished htm_index at 10-May-2026 14:16:31. Took 2 s
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/
/home/vamp1/pub_web/analysis/fishsoop/SharkBay/2026/ has 47 dates
ln -sf 20260509.html latest.html
ln -sf 20260509.gif latest.gif
finished htm_index at 10-May-2026 14:16:32. Took 2 s
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/
/home/vamp1/pub_web/analysis/fishsoop/Perth/2026/ has 129 dates
ln -sf 20260509.html latest.html
ln -sf 20260509.gif latest.gif
finished htm_index at 10-May-2026 14:16:33. Took 3 s
/home/vamp1/pub_web/analysis/fishsoop/AlbEsp/2026/
/home/vamp1/pub_web/analysis/fishsoop/AlbEsp/2026/ has 1 dates
ln -sf index.html latest.html
ln -sf index.gif latest.gif
finished htm_index at 10-May-2026 14:16:33. Took 4 s
/home/vamp1/pub_web/analysis/fishsoop/RechEyre/2026/
/home/vamp1/pub_web/analysis/fishsoop/RechEyre/2026/ has 67 dates
ln -sf 20260406.html latest.html
ln -sf 20260406.gif latest.gif
finished htm_index at 10-May-2026 14:16:34. Took 5 s
/home/vamp1/pub_web/analysis/fishsoop/SAgulfs/2026/
/home/vamp1/pub_web/analysis/fishsoop/SAgulfs/2026/ has 79 dates
ln -sf 20260501.html latest.html
ln -sf 20260501.gif latest.gif
finished htm_index at 10-May-2026 14:16:36. Took 6 s
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/
/home/vamp1/pub_web/analysis/fishsoop/BassStr/2026/ has 74 dates
ln -sf 20260510.html latest.html
ln -sf 20260510.gif latest.gif
finished htm_index at 10-May-2026 14:16:37. Took 7 s
/home/vamp1/pub_web/analysis/fishsoop/TasW/2026/
/home/vamp1/pub_web/analysis/fishsoop/TasW/2026/ has 88 dates
ln -sf 20260502.html latest.html
ln -sf 20260502.gif latest.gif
finished htm_index at 10-May-2026 14:16:38. Took 8 s
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/
/home/vamp1/pub_web/analysis/fishsoop/TasE/2026/ has 109 dates
ln -sf 20260510.html latest.html
ln -sf 20260510.gif latest.gif
finished htm_index at 10-May-2026 14:16:39. Took 9 s
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/
/home/vamp1/pub_web/analysis/fishsoop/SNSW/2026/ has 129 dates
ln -sf 20260509.html latest.html
ln -sf 20260509.gif latest.gif
finished htm_index at 10-May-2026 14:16:40. Took 10 s
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/
/home/vamp1/pub_web/analysis/fishsoop/NNSW/2026/ has 124 dates
ln -sf 20260504.html latest.html
ln -sf 20260504.gif latest.gif
finished htm_index at 10-May-2026 14:16:41. Took 12 s
/home/vamp1/pub_web/analysis/fishsoop/SGBR/2026/
/home/vamp1/pub_web/analysis/fishsoop/SGBR/2026/ has 6 dates
ln -sf 20260325.html latest.html
ln -sf 20260325.gif latest.gif
finished htm_index at 10-May-2026 14:16:41. Took 12 s
/home/vamp1/pub_web/analysis/fishsoop/CGBR/2026/
/home/vamp1/pub_web/analysis/fishsoop/CGBR/2026/ has 1 dates
ln -sf index.html latest.html
ln -sf index.gif latest.gif
finished htm_index at 10-May-2026 14:16:42. Took 12 s
/home/vamp1/pub_web/analysis/fishsoop/NGBR/2026/
/home/vamp1/pub_web/analysis/fishsoop/NGBR/2026/ has 14 dates
ln -sf 20260301.html latest.html
ln -sf 20260301.gif latest.gif
finished htm_index at 10-May-2026 14:16:42. Took 12 s
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/
/home/vamp1/pub_web/analysis/fishsoop/GOC/2026/ has 113 dates
ln -sf 20260509.html latest.html
ln -sf 20260509.gif latest.gif
finished htm_index at 10-May-2026 14:16:44. Took 14 s
/home/vamp1/pub_web/analysis/fishsoop/Au/2026/
/home/vamp1/pub_web/analysis/fishsoop/Au/2026/ has 1 dates
ln -sf 20260401.html latest.html
ln -sf 20260401.gif latest.gif
finished htm_index at 10-May-2026 14:16:44. Took 14 s
finished fishsoop plotting at 10-May-2026 14:16:44 (11.5mins work so far, now syncing...)
saved data from 5798 files in /home/vamp1/varney/gri159/IMOScache/fishsoop/data_2026_v4
rsync -av --delete --password-file=$PWFILE fishsoop/ csiro_website@oceancurrent.aodn.org.au::oceancurrent_website/fishsoop
finished fishsoop at 10-May-2026 14:18:11 (13mins work)